| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5142 |
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| Symbol | |
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| ID | 8228749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6210579 |
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| End bp | 6211313 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932990 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003089507 |
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| Protein GI | 255038886 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.546377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGACCT TAATTGTTGA TGACGAGCGA CTTGCGCGCA CTGAATTGAA AAGACTTCTT
GAACCATACA CCAAAATAGA GATCGTAGGT GAGGCCGCCA ATGCCGAAGA AGCCTTGAAA
CTCATTGAAG AACAGCAACC TGAGCTGCTC TTCCTGGACA TTCAGATGCC CGGCAAGAAC
GGTTTCGAGC TGCTTTCGTC GATCGAGGGC AAAAGTCCCG AGGTGATTTT TACCACCGCA
TTTGACGAAT ACGCCATTAA GGCCTTCGAA TTCAATGCAT TGGATTACCT TCTGAAACCG
ATTGACACGG AGCGGCTGAA AGAAACCATC CATCGGATCG AGGAAAACCA GGCCCAGCCC
GAAACGCCTT CGCACACCAA TGAGCGTGCG GAAAAGGTGC TCGGCGAGAA CGACCAGGTT
TTTGTGAAAG ACGGTGAAAA ATGCTGGTTT GTGAAGCTCG GCAAGATCCG CCTGTTCGAA
TCGATGGGTA ATTACGTTCG CCTGCATTTC GACGACCAGA AACCTTTGGT ACTGAAATCG
CTGAACAACC TGGAAGAGCG GCTGGACCCC AATACTTATT TCCGCGCCAA TCGTAAGCAT
ATCATCAATT TGCATTGGAT CGAAAAAATC GAACCGTGGT TTAGCGGCGG ATTGCTCGTG
ACGTTGCAGG GCGGCGATAA GATCGAAATC TCCCGGCGCC AGGCCATTCG TTTCAAGGAA
TTGATGAGCC TTTAA
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| Protein sequence | MRTLIVDDER LARTELKRLL EPYTKIEIVG EAANAEEALK LIEEQQPELL FLDIQMPGKN
GFELLSSIEG KSPEVIFTTA FDEYAIKAFE FNALDYLLKP IDTERLKETI HRIEENQAQP
ETPSHTNERA EKVLGENDQV FVKDGEKCWF VKLGKIRLFE SMGNYVRLHF DDQKPLVLKS
LNNLEERLDP NTYFRANRKH IINLHWIEKI EPWFSGGLLV TLQGGDKIEI SRRQAIRFKE
LMSL
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