| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5335 |
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| Symbol | |
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| ID | 8361512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6815079 |
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| End bp | 6815840 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967483 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003124967 |
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| Protein GI | 256424314 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.709567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAG TGATCATAGA GGATGAGAAA ATAACCGCGC GAGACCTGGT ACAGACCATT
CAGCAACTGT TTCCGCAGAT CGGCATCTTA AAGGTGCTGG GTACAGTGAA GGACAGTATC
AGTTATTTTA GTTCAGATCG CAGCGCGGAC CTGATCTTTG CTGATATACA GCTGGGAGAT
GGTCTGAGCT TTGAGATCTT CTCCGCCGTG GAAATAGACG TTCCTGTGAT CTTTTGTACG
GCCTATGATG AATACGCTTT ACATGCATTT AAAGCTAACG GATTTGACTA TATCCTGAAG
CCTTTTACCA ACGAGTCAGT ATCCGCCGCA ATTAATAAAT ACCTGGCTTT CAGGGGGCGG
ATTGCAGAGA ATGCCGTTCC CTATAAAGCA CTGGAACAGC TGTTTACTAC AAAGAAAACA
ACCGAAATAG GCGCTGTACT TGTATACCAG AAAGACAGGA TCATGCCGGT GGCGATCAGT
GATATCGCTT TTTTCTATTT GAAAAACGGA GTGGTTAACC TGACTACCTT TGATAAAAAG
ACCTATGTCG TCAATAAAAC GATGGACGAA CTAGGTAAAT TTACAGAACC GCTTTTCTTT
CGCGCTAACA GGCAGTATCT TGTGCATCGT AAGGCAGTAC TGGATGCTTC CAGTGCCCTT
TCCCGCAAAC TGACGCTTTC TTTGTCAGTG CCTGTACCGG AATCTGTTAC CATCAGTCGT
GAGAAGATGG GGCAATTCCT GGAATGGCTG ACACAGCGTT GA
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| Protein sequence | MKVVIIEDEK ITARDLVQTI QQLFPQIGIL KVLGTVKDSI SYFSSDRSAD LIFADIQLGD
GLSFEIFSAV EIDVPVIFCT AYDEYALHAF KANGFDYILK PFTNESVSAA INKYLAFRGR
IAENAVPYKA LEQLFTTKKT TEIGAVLVYQ KDRIMPVAIS DIAFFYLKNG VVNLTTFDKK
TYVVNKTMDE LGKFTEPLFF RANRQYLVHR KAVLDASSAL SRKLTLSLSV PVPESVTISR
EKMGQFLEWL TQR
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