| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1001 |
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| Symbol | |
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| ID | 4069766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 1264791 |
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| End bp | 1265579 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637983008 |
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| Product | LytR/AlgR family transcriptional regulator |
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| Protein accession | YP_590078 |
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| Protein GI | 94968030 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0103069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTTT CTGCGGTGAT TGTTGACGAC GAGCAGCTGG CGCGCGACGA GCTCGCCTAC
CTGCTGCAAT CCATTGGCGA TGTGGACGTC ATCGCCCAGG GCAAGAACGG CGTTGAGGGC
GTGAACCTGA TCAAGGAACA CAACCCCGAC CTCGTTTTCC TCGATGTGCA GATGCCCGGC
CTCGACGGCT TTGGCGTCAT CAAAAAGCTC CTCGACCGTA AGGTCGCGAT GCCGCAGGTG
ATCTTTGCGA CCGCGTTCGA TCAATATGCG GTGAAGGCCT TTGAAGTGAA TGCCGTTGAC
TACGTGCTCA AGCCTTACGA TAAGAAGCGC ATTGCGCAGG CGATCGACAA GGCCAAGAAG
AACCTCGAAA GTGCCGAGCC CGCGCCCAGC AACGATCAGC GCATTGACGC GCTGGTGAAG
ATGCTCGAAC AGAAGACAGA GCAGAAAGCC GGGCAATCGA AGATATTGCT CAAGGCCAAT
GGCCGCATGT TCCTGGTGGA CCAGAAAGAC ATCTGCTTCG CCTCGATCGA AGACGGCGTG
ATTACCGTGG TTGCCGCCAA CATGGAAGGC CAATCGAATT GCCGCACGCT GGAAGAGCTG
CTGGACTCGC TCGACCCGGG AGCATTCTGG CGCGCGCACC GCTCGTTCCT GGTGAACATC
AACCGGATCA AGGAAGTAGT GCCGTGGTTC AAGAGCAGCT ACCAGATCCG CATGGATGAC
CGTAAGCAGA CGGAAATTCC CGTCAGCCGC GCGCAGACCA AGCGGCTCCG CGAGTTGTTC
GGCTTGTGA
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| Protein sequence | MSLSAVIVDD EQLARDELAY LLQSIGDVDV IAQGKNGVEG VNLIKEHNPD LVFLDVQMPG
LDGFGVIKKL LDRKVAMPQV IFATAFDQYA VKAFEVNAVD YVLKPYDKKR IAQAIDKAKK
NLESAEPAPS NDQRIDALVK MLEQKTEQKA GQSKILLKAN GRMFLVDQKD ICFASIEDGV
ITVVAANMEG QSNCRTLEEL LDSLDPGAFW RAHRSFLVNI NRIKEVVPWF KSSYQIRMDD
RKQTEIPVSR AQTKRLRELF GL
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