| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0582 |
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| Symbol | |
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| ID | 8224151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 662402 |
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| End bp | 663163 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928458 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003085012 |
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| Protein GI | 255034391 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000831919 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00409076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGTCC TGAACCCGAT CCGCTGCTTC ATCGTCGATG ACGAGATCCA GGCCGTGCAT
AATCTCCGGC TCGCATTGGA GGCGCATTGC CCGCAGGTAG AGGTAGCCGG GTACGCGCAT
AATGTGCACG AGGCGCACGA ATTTCTGGCA CGCCGGCAAA CCGATATTCT GTTCCTGGAC
ATCCGTTTGC AGAACGAAAC GGGTTTCGAT TTGCTGAAAC GGCTCAATGG CTACCAGGGC
AGCATTATTT TCACGACCGC CTATGATCTG TATGGCATTC AGGCGATCAA GTTTTCGGCT
ACCGATTACC TGCTCAAACC GCTCGATCAC CGGGAACTGG CCGAGGCTGT GGGAAAAGCC
ACCGATCGGA AAAAGGAGCG CGACCAGAGT GCGCAGATTG CCATGCTGGT GCAGTCGTTT
GAAAGCCTTC CCATGCAGAA ACAGAAGAAG ATTGCACTCG CCGAAGCCAG CGAAATCCAT
TACGTGCTGA TCGACGACAT CATTTTTTGC AAATCCGACA ACAGTTATAC CACCTTCCAT
TTAACCGGAA GCAGGAAAAT AACCGTCAGC AAGCCCATTT CCGAATATGA AGTCATTCTC
GAACCCTACG GCTTTCTGCG GACGCATCAA TCGTACCTGA TCAATAAAAA CAGGATTGTT
TCATTTAAAA AGGAAGACGG CGGTTATTTG ATGATGGAGG GGAATTTCCA GGCAGTGGTA
AGCAAGCAAC GACGCCATCT TTTGAAAGAG TTGTTTTTAT AA
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| Protein sequence | MAVLNPIRCF IVDDEIQAVH NLRLALEAHC PQVEVAGYAH NVHEAHEFLA RRQTDILFLD
IRLQNETGFD LLKRLNGYQG SIIFTTAYDL YGIQAIKFSA TDYLLKPLDH RELAEAVGKA
TDRKKERDQS AQIAMLVQSF ESLPMQKQKK IALAEASEIH YVLIDDIIFC KSDNSYTTFH
LTGSRKITVS KPISEYEVIL EPYGFLRTHQ SYLINKNRIV SFKKEDGGYL MMEGNFQAVV
SKQRRHLLKE LFL
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