| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1220 |
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| Symbol | |
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| ID | 8367648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1425778 |
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| End bp | 1426494 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644983649 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003141331 |
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| Protein GI | 256820052 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.132093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTA CTTGTATCAT TGTAGACGAT GAGCCTATGG CGCTCCAACT GCTAGAAAGT
TATGTGGTAA AGACTCCTTT TCTGAGGTTA GTCGGCAAAT TTAGCAATGC TATTGATGTA
TTGACGTTCT TATATGAAGG TAGCGCACCC GACCTTATCT ATATGGATAT CCAAATGCCT
GAACTTACAG GGCTCCAGCT TTCTAAAAAG ATACCCACCT CTACTAAAAT TGTTTTTACT
ACGGCTTTTG ACCAATACGC TATTGAGGGA TATAAGGTAA ACTCTATTGG ATACTTATTG
AAACCTTTTG ATTATGCTGA GTTTTTGGAG ACGGCTCAAA AGGCTTTGCT ATTAAGCACA
CCTTCTGTTA CTGAAAAACC GCTCGAAATA GCGCAGAATT ATATGTTTGT AAAGGCAGAT
TACAAGCAAA TAAAGGTGAT GTATGATGAT ATTTTGTATA TAGAAAGTCT TAAAGATTAC
GTAAAAATAT ACCTCAACAG TCAGTCACAA CCTATTGTAA CGCTGATGAG CTTGAAGAAA
TTGGAAGAGG AATTACCGGA AGAACGGTTT ATGCGAGTGC ATAGGTCGTT TATAGTAGCT
CTGGACAAAG TGAAAGTAGT GGAGCGCAAC CAAATAGTAT TTGGCAAACA ACGCATTACG
ATTGCTGAGA ATTGTAGAGA GGCGTTTCTG AATAAAATAA TGCCTAATGG TCAATAA
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| Protein sequence | MQLTCIIVDD EPMALQLLES YVVKTPFLRL VGKFSNAIDV LTFLYEGSAP DLIYMDIQMP
ELTGLQLSKK IPTSTKIVFT TAFDQYAIEG YKVNSIGYLL KPFDYAEFLE TAQKALLLST
PSVTEKPLEI AQNYMFVKAD YKQIKVMYDD ILYIESLKDY VKIYLNSQSQ PIVTLMSLKK
LEEELPEERF MRVHRSFIVA LDKVKVVERN QIVFGKQRIT IAENCREAFL NKIMPNGQ
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