| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01918 |
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| Symbol | |
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| ID | 6776055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2066708 |
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| End bp | 2067535 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642755354 |
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| Product | putative response regulator in two-component regulatory system |
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| Protein accession | YP_002126216 |
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| Protein GI | 196156727 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.159199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAGC AAGTGATTAA AACCATTGTA GTGGACGACG AACCTTTAGC ACGCAAAGGG
CTTCGTGCCA GGTTAGAACG TCATGATGAT GTACAGGTTC TTGCCGAGTG TCAAAATGGC
CTTGAAGCGG TGAGTAGTAT CTCTCAGCAT CGCCCCGATT TAGTGTTTCT AGATATCCAA
ATGCCGGGCT TAAACGGGTT TCAGGTAATT CACAAACTGC GTGAACTAAA GCAACCCATC
CCAATGATAG TATTTGTAAC TGCGTACGAT AGCTATGCGA TTAAGGCATT CGATGTTCAT
GCTTTAGACT ATCTACTAAA GCCGGCAGAC GACGAACGTC TTGGCGCGGC GCTTAACAAG
GTTAGAGAAT ACTTCTCTAC TCAACATCAA GATGAGCAAT CGCAAAAGCT TGTTAGCCTT
GTTGCTGAAT TAACCGGTGA CGACTGCGAA GAAATCTTGC GCAAGCTTGC TAACGGTGAA
CCAGTGGAAA CTAATCCATA CCCAGATGTA CTGGCCATTA AAGATGGCTC GGAAGTGACC
CGTGTTAATG TTCAGGATAT TCAATGGATA GACGCCGCGG GCGATTATAT GTGTGTACAT
GCCCTAGATG GTATGCATAT TATGCGTAAG ACAATGAAAG AATTAGAGCA AGAACTAAAC
CCGCAGTTCT TCGTGCGTGT TCACCGTTCG GCTATTGCTA ATATCCGCTT TGTCAAAAAG
CTAGTTAGCC ACATAAGCGG CGAGTATCAC TTGATACTGC AAAACGATAC TGAACTTAAA
GTAAGCCGCA GTCACCGCGA CAAAGTAAAA GCGGCAATGA AAATGTAA
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| Protein sequence | MTKQVIKTIV VDDEPLARKG LRARLERHDD VQVLAECQNG LEAVSSISQH RPDLVFLDIQ
MPGLNGFQVI HKLRELKQPI PMIVFVTAYD SYAIKAFDVH ALDYLLKPAD DERLGAALNK
VREYFSTQHQ DEQSQKLVSL VAELTGDDCE EILRKLANGE PVETNPYPDV LAIKDGSEVT
RVNVQDIQWI DAAGDYMCVH ALDGMHIMRK TMKELEQELN PQFFVRVHRS AIANIRFVKK
LVSHISGEYH LILQNDTELK VSRSHRDKVK AAMKM
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