| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0979 |
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| Symbol | |
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| ID | 6206821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1204019 |
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| End bp | 1204747 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690602 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001817867 |
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| Protein GI | 182412801 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0238694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCGC ATCGCGCCCT CATCGTCGAC GACGAGCGGC TGGCCCGTCG CGAACTCGCC
TATCTGCTTG CGGACCACCC GGAGATCGAG GTGGCCGCCG AAGCCGGCTC CGTCGGCGAA
GCTGCCGCCG CGCTGGAACG CCTCCGGCCC GAGCTTTTGT TTCTCGATAT CCAGATGCCC
GGCGAGAGCG GTTTCGATCT CTTCGAACGC GCCCGCGTAA CCGCGCGTGT GATCTTCGTG
ACAGCGCACG ATCAGTTCGC GTTGCGTGCG TTCGAGGTGA ACGCGCTCGA CTACCTGATG
AAGCCGGTGA ATCCGGCGCG GCTGCGCGTG GCGGTCGACC GTTTTCTGGG TCGCGGCGCG
CCGCCGCCGG GACCGAGCGC GGGCCGGATC AATTACGACG ATTCGGTTTT CGTTACGATC
GATCAGGCGC CGCGGTTCAT CGCGGTGGCG TCGATCGCGT GCATCCTGGC GGAGGGCGAC
TACACGCGGT TGATCAGCAC GACGGGTCCG ATCGGGCTCG TGCTGAAACC GATGAAGGAA
TGGGAACAGT TGCTGCCCGA GCGGCATTTC GCGCGGATCC AGCGGTCCGC GATTGTCAAC
TGCGCGCACG TGGCGCGGTT CGAGCCGTGG TTCAACGGCG CGATGCAGGT GCACCTGAAA
GCGCTGCCCG AGCCGCTGAC GATGAGCCGG CGCTATGCGC GACAGTTCCG CGCGAAGTTT
GCCGTTTAG
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| Protein sequence | MNPHRALIVD DERLARRELA YLLADHPEIE VAAEAGSVGE AAAALERLRP ELLFLDIQMP
GESGFDLFER ARVTARVIFV TAHDQFALRA FEVNALDYLM KPVNPARLRV AVDRFLGRGA
PPPGPSAGRI NYDDSVFVTI DQAPRFIAVA SIACILAEGD YTRLISTTGP IGLVLKPMKE
WEQLLPERHF ARIQRSAIVN CAHVARFEPW FNGAMQVHLK ALPEPLTMSR RYARQFRAKF
AV
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