| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5312 |
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| Symbol | |
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| ID | 8228923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6412479 |
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| End bp | 6413246 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933157 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003089670 |
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| Protein GI | 255039049 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0977362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAC TGATTATCGA AGACGAATAT CCCGCAGCCG AAAGGCTGGA AAAGCTGATC
AAAAAACTCG ACCCGCGCAT GGAGGTGCGG GCGGTGCTGG AAAGCGTGGA AGCCGCCCGC
AAATGGTTCG CGAATGCCGA GCCGGTGGAC TTGATATTTT CCGATATCCA GCTCGCCGAC
GGGCTCAGTT TCCAAATATT CGAAGAATTC CCCGCCCACA GCCCGATAAT TTTCACCACC
TCGTACGACG AGTACGCGAT CAAGGCATTC CGCGTCAAGA GCATCGACTA TCTTTTGAAA
CCGATCAAAC TGCCGGAACT CGCTGATGCG ATCCGCAAGT ATGAAGAAAT TCGGGAGGAT
TTTTCGCCCA AGGCCTACGC CCGGAAGGTC GAAAGCCTGC TTGATAGCCT CGAAATGACC
AAACGGCCTT TTAAAACAAG GTTTCTCGTC AAAAACGGCG AACAGCTGAT CCCTATCAAC
CAGGAGCACG TCGCGTATTT CTTCACGGCC AATGAAATGT CTTGCCTTGT CGCCACCGAC
GGCCGGCAAT ACCTGGTAGA TTACAAGCTG GAAGAGCTGG AATCGCTGGT GGACCCGATG
AATTTCTTCC GGCTCAACCG CCAGTTCATC GCCCGCATCG ACGCCATTCA AAAAATTCAC
ACCTATTTCA ATGGTAAACT CAAAATAGAG CTCCGCCCGC AGGCATCACA GGAAATCGTG
GTGAGCCGGG AGAAAGCGCC CGCATTTAAG GCGTGGCTCG AAACCTAG
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| Protein sequence | MKILIIEDEY PAAERLEKLI KKLDPRMEVR AVLESVEAAR KWFANAEPVD LIFSDIQLAD
GLSFQIFEEF PAHSPIIFTT SYDEYAIKAF RVKSIDYLLK PIKLPELADA IRKYEEIRED
FSPKAYARKV ESLLDSLEMT KRPFKTRFLV KNGEQLIPIN QEHVAYFFTA NEMSCLVATD
GRQYLVDYKL EELESLVDPM NFFRLNRQFI ARIDAIQKIH TYFNGKLKIE LRPQASQEIV
VSREKAPAFK AWLET
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