More than 300 homologs were found in PanDaTox collection
for query gene Slin_3594 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013730  Slin_3594  two component transcriptional regulator, LytTR family  100 
 
 		 260 aa  526  1e-148  Spirosoma linguale DSM 74  Bacteria  normal  0.833136  normal  0.0457058 
 
 
-
 
NC_013037  Dfer_4386  two component transcriptional regulator, LytTR family  62.93 
 
 		 260 aa  333  2e-90  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_5734  two component transcriptional regulator, LytTR family  44.58 
 
 		 257 aa  223  3e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_2443  LytTR family two component transcriptional regulator  34.78 
 
 		 279 aa  162  4.0000000000000004e-39  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_5142  two component transcriptional regulator, LytTR family  41.53 
 
 		 244 aa  162  6e-39  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.546377  normal  1 
 
 
-
 
NC_008009  Acid345_1001  LytR/AlgR family transcriptional regulator  35.85 
 
 		 262 aa  154  2e-36  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0103069 
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  37.16 
 
 		 260 aa  152  4e-36  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal  1 
 
 
-
 
NC_008751  Dvul_2356  response regulator receiver protein  36.59 
 
 		 257 aa  152  4e-36  Desulfovibrio vulgaris DP4  Bacteria  normal  0.325932  normal  0.149931 
 
 
-
 
NC_013457  VEA_000974  response regulator of the LytR/AlgR family  36.4 
 
 		 263 aa  152  5e-36  Vibrio sp. Ex25  Bacteria  normal  0.728867  n/a   
 
 
-
 
NC_013132  Cpin_6586  two component transcriptional regulator, LytTR family  37.17 
 
 		 246 aa  152  5e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.318104  normal  1 
 
 
-
 
NC_013037  Dfer_1004  two component transcriptional regulator, LytTR family  35.91 
 
 		 257 aa  152  5e-36  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.00878343  normal  0.279198 
 
 
-
 
NC_009456  VC0395_0387  response regulator  36.29 
 
 		 261 aa  151  8e-36  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_07024  transcriptional regulator  36 
 
 		 263 aa  151  1e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_2397  two component transcriptional regulator, LytTR family  36 
 
 		 261 aa  149  3e-35  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_0374  two component transcriptional regulator, LytTR family  37.39 
 
 		 242 aa  147  2.0000000000000003e-34  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_1761  two component transcriptional regulator, LytTR family  33.72 
 
 		 251 aa  147  2.0000000000000003e-34  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_1542  LytTr DNA-binding region  38.14 
 
 		 245 aa  147  2.0000000000000003e-34  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.300206 
 
 
-
 
NC_013730  Slin_1794  two component transcriptional regulator, LytTR family  35.25 
 
 		 260 aa  144  1e-33  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_3291  LytR/AlgR family transcriptional regulator  34.11 
 
 		 258 aa  144  1e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.393667  normal  1 
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  35.25 
 
 		 266 aa  144  1e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  31.02 
 
 		 275 aa  144  1e-33  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_003910  CPS_2278  LytTr DNA-binding response regulator  32.85 
 
 		 280 aa  144  2e-33  Colwellia psychrerythraea 34H  Bacteria  normal  0.421967  n/a   
 
 
-
 
NC_010571  Oter_0067  LytTR family two component transcriptional regulator  36.36 
 
 		 268 aa  142  4e-33  Opitutus terrae PB90-1  Bacteria  normal  0.169577  normal  0.169612 
 
 
-
 
NC_007912  Sde_0480  response regulator receiver domain-containing protein  33.46 
 
 		 265 aa  142  5e-33  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  32.81 
 
 		 253 aa  142  7e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal  1 
 
 
-
 
NC_010717  PXO_04138  two-component system regulatory protein  34.48 
 
 		 245 aa  142  7e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.739319  n/a   
 
 
-
 
NC_007519  Dde_0161  LytR/AlgR family transcriptional regulator  34.12 
 
 		 270 aa  140  1.9999999999999998e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2385  response regulator receiver protein  31.62 
 
 		 272 aa  140  1.9999999999999998e-32  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3913  LytTR family two component transcriptional regulator  34.09 
 
 		 268 aa  140  3e-32  Opitutus terrae PB90-1  Bacteria  normal  0.316099  normal  1 
 
 
-
 
NC_013385  Adeg_0898  two component transcriptional regulator, LytTR family  33.33 
 
 		 265 aa  139  3.9999999999999997e-32  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_6007  alginate biosynthesis regulatory protein AlgR  34.24 
 
 		 248 aa  139  4.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  0.404994  n/a   
 
 
-
 
NC_013061  Phep_3159  response regulator receiver  34.24 
 
 		 242 aa  139  4.999999999999999e-32  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_0271  two component transcriptional regulator, LytTR family  32.03 
 
 		 256 aa  139  6e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0279  two-component response regulator AlgR  33.46 
 
 		 248 aa  139  7e-32  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_1964  LytR/AlgR family transcriptional regulator  34.09 
 
 		 255 aa  138  7.999999999999999e-32  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.777054 
 
 
-
 
NC_008463  PA14_69470  alginate biosynthesis regulatory protein AlgR  34.24 
 
 		 248 aa  138  7.999999999999999e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.184834  normal  1 
 
 
-
 
NC_008009  Acid345_0420  LytR/AlgR family transcriptional regulator  32.17 
 
 		 317 aa  137  1e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0328897  normal  0.0302219 
 
 
-
 
NC_009675  Anae109_1440  putative two-component response-regulatory protein YehT  34.68 
 
 		 236 aa  138  1e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  33.2 
 
 		 252 aa  137  2e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  36.32 
 
 		 238 aa  136  3.0000000000000003e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  34.06 
 
 		 239 aa  136  4e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  34.06 
 
 		 239 aa  136  4e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_3900  response regulator receiver domain-containing protein  37.39 
 
 		 261 aa  136  4e-31  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  34.06 
 
 		 239 aa  136  4e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal  1 
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  34.06 
 
 		 239 aa  136  4e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  34.06 
 
 		 239 aa  136  4e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_2328  LytTR family two component transcriptional regulator  30.36 
 
 		 255 aa  136  4e-31  Opitutus terrae PB90-1  Bacteria  normal  0.261765  decreased coverage  0.00199939 
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  34.06 
 
 		 239 aa  135  5e-31  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_0231  LytR/AlgR family transcriptional regulator  33.84 
 
 		 254 aa  135  6.0000000000000005e-31  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.740894 
 
 
-
 
NC_007517  Gmet_2697  LytR/AlgR family transcriptional regulator  34.84 
 
 		 240 aa  135  6.0000000000000005e-31  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_4495  LytTR family two component transcriptional regulator  35.11 
 
 		 245 aa  135  6.0000000000000005e-31  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17015 
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  33.62 
 
 		 239 aa  135  6.0000000000000005e-31  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  33.86 
 
 		 255 aa  135  7.000000000000001e-31  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_008048  Sala_2673  response regulator receiver protein  32.48 
 
 		 268 aa  135  8e-31  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.587227  normal  0.606797 
 
 
-
 
NC_010506  Swoo_1765  putative two-component response-regulatory protein YehT  33.86 
 
 		 232 aa  135  8e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  0.199181  hitchhiker  0.00544661 
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  35.87 
 
 		 238 aa  135  9e-31  Yersinia pestis Angola  Bacteria  normal  1  normal  0.159726 
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  35.87 
 
 		 238 aa  135  9e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_2906  two component transcriptional regulator, LytTR family  38.98 
 
 		 245 aa  135  9e-31  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010577  XfasM23_1226  LytTR family two component transcriptional regulator  33.04 
 
 		 252 aa  135  9.999999999999999e-31  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_3733  response regulator receiver domain-containing protein  31.4 
 
 		 249 aa  134  9.999999999999999e-31  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.766169 
 
 
-
 
NC_010513  Xfasm12_1259  response regulator receiver protein  33.04 
 
 		 252 aa  134  9.999999999999999e-31  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_02054  predicted response regulator in two-component system withYehU  33.62 
 
 		 239 aa  134  1.9999999999999998e-30  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_1533  two component transcriptional regulator, LytTR family  33.62 
 
 		 239 aa  134  1.9999999999999998e-30  Escherichia coli DH1  Bacteria  normal  0.726215  n/a   
 
 
-
 
NC_012892  B21_02012  hypothetical protein  33.62 
 
 		 239 aa  134  1.9999999999999998e-30  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_2685  putative two-component response-regulatory protein YehT  32.68 
 
 		 236 aa  134  1.9999999999999998e-30  Shewanella baltica OS223  Bacteria  normal  0.0538398  hitchhiker  0.000367908 
 
 
-
 
NC_009801  EcE24377A_2413  putative two-component response-regulatory protein YehT  33.62 
 
 		 239 aa  134  1.9999999999999998e-30  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1695  putative two-component response-regulatory protein YehT  32.68 
 
 		 236 aa  134  1.9999999999999998e-30  Shewanella baltica OS195  Bacteria  decreased coverage  0.00000884824  normal  1 
 
 
-
 
NC_009665  Shew185_1658  putative two-component response-regulatory protein YehT  32.68 
 
 		 236 aa  134  1.9999999999999998e-30  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000153786  n/a   
 
 
-
 
NC_013037  Dfer_2256  two component transcriptional regulator, LytTR family  34.73 
 
 		 262 aa  134  1.9999999999999998e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.596319 
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  38.74 
 
 		 237 aa  134  1.9999999999999998e-30  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  33.33 
 
 		 241 aa  134  1.9999999999999998e-30  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_009052  Sbal_1673  putative two-component response-regulatory protein YehT  32.68 
 
 		 236 aa  134  1.9999999999999998e-30  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000537167  n/a   
 
 
-
 
NC_011353  ECH74115_3112  putative two-component response-regulatory protein YehT  33.62 
 
 		 239 aa  134  1.9999999999999998e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.148941 
 
 
-
 
NC_010468  EcolC_1522  putative two-component response-regulatory protein YehT  33.62 
 
 		 239 aa  134  1.9999999999999998e-30  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009800  EcHS_A2259  putative two-component response-regulatory protein YehT  33.62 
 
 		 239 aa  134  1.9999999999999998e-30  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_0919  putative two-component response-regulatory protein YehT  33.62 
 
 		 239 aa  133  3e-30  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_0036  LytR/AlgR family transcriptional regulator  38.18 
 
 		 248 aa  133  3e-30  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_3958  LytTR family two component transcriptional regulator  32.69 
 
 		 246 aa  132  3.9999999999999996e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_1083  putative two-component response-regulatory protein YehT  34.98 
 
 		 239 aa  132  3.9999999999999996e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.450563  normal  1 
 
 
-
 
NC_011071  Smal_0421  two component transcriptional regulator, LytTR family  33.6 
 
 		 256 aa  132  3.9999999999999996e-30  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.268274 
 
 
-
 
NC_010424  Daud_0469  response regulator receiver protein  34.62 
 
 		 254 aa  132  5e-30  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_0063  response regulator receiver:LytTr DNA-binding region  32.7 
 
 		 248 aa  132  6e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_0765  LytR/AlgR family transcriptional regulator  32.44 
 
 		 247 aa  132  6e-30  Psychrobacter cryohalolentis K5  Bacteria  normal  0.584976  normal  0.255142 
 
 
-
 
NC_007298  Daro_2093  putative two-component response-regulatory protein YehT  33.78 
 
 		 237 aa  131  1.0000000000000001e-29  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_3531  two component transcriptional regulator, LytTR family  36.96 
 
 		 243 aa  130  2.0000000000000002e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_2432  putative two-component response-regulatory protein YehT  34.23 
 
 		 236 aa  130  2.0000000000000002e-29  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000158974  hitchhiker  0.00361478 
 
 
-
 
NC_012880  Dd703_0957  putative two-component response-regulatory protein YehT  33.33 
 
 		 241 aa  130  2.0000000000000002e-29  Dickeya dadantii Ech703  Bacteria  normal  0.147856  n/a   
 
 
-
 
NC_008577  Shewana3_2594  putative two-component response-regulatory protein YehT  33.78 
 
 		 236 aa  130  2.0000000000000002e-29  Shewanella sp. ANA-3  Bacteria  normal  0.0103906  hitchhiker  0.00157605 
 
 
-
 
NC_012917  PC1_3149  putative two-component response-regulatory protein YehT  37.28 
 
 		 238 aa  130  2.0000000000000002e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_0127  alginate biosynthesis regulatory protein AlgR  32.32 
 
 		 248 aa  129  3e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_1130  putative two-component response-regulatory protein YehT  37.28 
 
 		 238 aa  130  3e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_2502  putative two-component response-regulatory protein YehT  33.78 
 
 		 236 aa  130  3e-29  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00178929  normal  0.0452702 
 
 
-
 
NC_009483  Gura_2791  LytTR family two component transcriptional regulator  35.66 
 
 		 250 aa  129  4.0000000000000003e-29  Geobacter uraniireducens Rf4  Bacteria  normal  0.073585  n/a   
 
 
-
 
NC_008048  Sala_0930  response regulator receiver protein  33.59 
 
 		 243 aa  129  5.0000000000000004e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.748451 
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  29.84 
 
 		 243 aa  128  8.000000000000001e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_1279  two component transcriptional regulator, LytTR family  33.19 
 
 		 248 aa  128  9.000000000000001e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.111911  normal  0.254446 
 
 
-
 
NC_013037  Dfer_1317  two component transcriptional regulator, LytTR family  30.99 
 
 		 261 aa  127  2.0000000000000002e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4382  LytTR family two component transcriptional regulator  33.09 
 
 		 273 aa  127  2.0000000000000002e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010424  Daud_0119  response regulator receiver protein  30.92 
 
 		 249 aa  127  2.0000000000000002e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00984  putative two-component response-regulatory protein YehT  33.84 
 
 		 242 aa  127  2.0000000000000002e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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