| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6676 |
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| Symbol | |
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| ID | 8362867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8371754 |
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| End bp | 8372515 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644968810 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003126280 |
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| Protein GI | 256425627 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTT TAATTATAGA GAATGAAATC AATACGGCAA ATGAGTTGAA AAGAATATTG
GTTGATCTGG ATGCATCCAA TATTATAATA GCCATCCTTG ATTCCGTAGA AGAGAGTGTT
AAGTTTTTGA GAGGGAATGA CTTACCGGAT CTGATCTTTT CTGATATTCA ACTGGCAGAT
GGAATGTGTT TCGACATCTT CAGGGAAGTT CCCATCAAAA CACCCATAAT TTTTTGTACA
TCTTTTGATG AATATATGCT TGATGCCTTT AAAACAAATG CAGTAAGCTA TTTATTAAAA
CCTATCACTA AAGATTCGGT AAGAACAGCA ATGGAGAAAT ATCAAACACT GAAATCAGTT
TTTGAATCAG CTGCTGCGAC ACTTACTATT GAAAAACTAG GCCAGCAATT AAAAAACAAC
TACAAAAAGT CTATACTTGT AGAACAACGG GAGAGTATTA TTCCTCTTCC TGTAAATGAT
ATTGCTTATA TTTATTTGGA AAATACGATA GTACAAATCG GAACAGCCAA AAATCACCAA
TATTTCATTT CTTCAACGCT TGACGAATTG GAGAGAATGC TTGATCCGGA GGTGTTCTAT
CGCGCCAATC GCCAATTCAT CATTAATAAG CTTTCCATTG TTAATGTAGA AAAAATTTTC
CCCCGAAAGT TGCTTGCTAA ACTTGCTGTA AATACCCCCG AATCAATAGT AATCAGCAAA
GCAAATGCAT CATCCTTTCT CCGATGGCTG GAAGGTTTGT AA
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| Protein sequence | MRILIIENEI NTANELKRIL VDLDASNIII AILDSVEESV KFLRGNDLPD LIFSDIQLAD
GMCFDIFREV PIKTPIIFCT SFDEYMLDAF KTNAVSYLLK PITKDSVRTA MEKYQTLKSV
FESAAATLTI EKLGQQLKNN YKKSILVEQR ESIIPLPVND IAYIYLENTI VQIGTAKNHQ
YFISSTLDEL ERMLDPEVFY RANRQFIINK LSIVNVEKIF PRKLLAKLAV NTPESIVISK
ANASSFLRWL EGL
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