| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3900 |
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| Symbol | |
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| ID | 3967165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4919225 |
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| End bp | 4920010 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922997 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_529367 |
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| Protein GI | 90023540 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATTA ATGCAATTAT CGTAGATGAC GAAGCCCATG CACGCCAAGC ATTGCAGCAT
TTGCTTGGCA CATATAAAGA AATTAATATT ATTGCCCAGT GCGAGAATGG CAAAACCGCC
GTAAAAGCCG TGCACGAGCT AGAGCCGCAG GTAATGTTTT TAGATATTCA TATGCCCAAG
CTAGATGGCT TTGAAGTACT AGAACTTTTA GGTGATGCGG CGCCAATAAC CGTATTTATA
ACCGCACACG ACGACTACGC CATACAAGCA TTTGAAAATA ACGCCTTAGA CTATTTGTTA
AAACCCGTAA GCGAAGAGCG TTTAGCGCGC ACCGTAGAGC GCATTTGCCA GCGTATAAAA
GAAGCCAACC TAACAGCACA GCCAAACCCA GAAGGCGAAC AAAGCCAACG CACAACAGAT
GTAGTACAAA ATTATATTCA ACGCCAAGCC CCCATAGGCA GGGTACTAGT GCGAGATAAA
GGCGACGTGC ATGTAATTTC CACAACCAAT ATTATTGCTA TAGAGGCCGC CGACGACTAT
GTGGTTATTC ACGTCCCTGG CGGCACCCAC ATAAAACAAG AGCGCCTAAG CCGCTTAGAA
GAACTACTAG ACCCGCAACA ATTCTGCCGC ATTCATCGCT CTACCATTAT TAACTTAGAT
TATTTACAGG GCATAGAAAC CGAAGGCAAA GATACCCGCT TTGCCAACTT AAAAACTCCA
GAAGGAGAGC AAAAACAATT TGCGATTAGT CGCGGGGGGT ATGGGAAGTT GATTGAGGTA
TTGTGA
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| Protein sequence | MPINAIIVDD EAHARQALQH LLGTYKEINI IAQCENGKTA VKAVHELEPQ VMFLDIHMPK
LDGFEVLELL GDAAPITVFI TAHDDYAIQA FENNALDYLL KPVSEERLAR TVERICQRIK
EANLTAQPNP EGEQSQRTTD VVQNYIQRQA PIGRVLVRDK GDVHVISTTN IIAIEAADDY
VVIHVPGGTH IKQERLSRLE ELLDPQQFCR IHRSTIINLD YLQGIETEGK DTRFANLKTP
EGEQKQFAIS RGGYGKLIEV L
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