Gene Daro_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2093 
Symbol 
ID3566834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2249600 
End bp2250313 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID637680566 
Productputative two-component response-regulatory protein YehT 
Protein accessionYP_285306 
Protein GI71907719 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGTAT TGATCATTGA CGACGAAACC CCGGCCCGCG AGGAAATCGC CCGCGTCCTG 
GCCAAGGAGC CGGATATTGT CATCCTCGGC GAATGCGCCA ACGCCATCGA CGGGCTCTCG
GCAATCAACC GGCTGCATCC GGAAGTGGTG TTTCTGGATA TCCAGATGCC GCGCGTCAGC
GGCCTGGAGC TGTTGAGCAT GCTCGATCCG GAAAAGATGC CGCGTGTCGT TTTTCTCACT
GCGTACAACG AATACGCCTT GCAGGCCTTC GATCAGGATG CCTTCGATTA CCTGCTCAAG
CCGATCGATC CAGCGCGGCT GGAGATCACG CTGCAGCGCC TGCGCCGCGA CCGGGCGCCA
AATGAGGCTT TGTTCAAGGC CGCGGCGCCG CTCAAGCAGA TTCCCTGTCC GGGTCATCAA
CGGGTGCAAC TGGTCAAGGT CGATAGCGTC GAATATGCCT ATTCCAATAC GACGGGGGTG
TACGTCGTGA CTCAGGATGG TGCCGAGCAT TTCACCGAAT TGACCCTGCG CACGCTGGAA
GAAAAGACAC CGCTATTGCG TTGCCACCGG CAGTACCTGG TCAATCCGGA GCAGATCCAG
GAAATCGTCT TTCAGGATAT CGGTGGCGCC GAGATCGTCA CCCACGGTGG TCGTCGGCTA
CCAGTCAGCC GGCGCCTGTT TGGCGAACTC AAAGAGCACC TCGGTTTATC CTGA
 
Protein sequence
MNVLIIDDET PAREEIARVL AKEPDIVILG ECANAIDGLS AINRLHPEVV FLDIQMPRVS 
GLELLSMLDP EKMPRVVFLT AYNEYALQAF DQDAFDYLLK PIDPARLEIT LQRLRRDRAP
NEALFKAAAP LKQIPCPGHQ RVQLVKVDSV EYAYSNTTGV YVVTQDGAEH FTELTLRTLE
EKTPLLRCHR QYLVNPEQIQ EIVFQDIGGA EIVTHGGRRL PVSRRLFGEL KEHLGLS