| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2974 |
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| Symbol | |
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| ID | 5200718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3259620 |
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| End bp | 3260420 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640582523 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001263463 |
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| Protein GI | 148555881 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.318128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCC GAACCATTCT CGTCGACGAC GAGCCGCTCG CCATTCAGGG CTTGAGATTG
AGGCTGGCGG CACACGAGGA TGTCGAAATC ATCGAAACCT GCCTGAACGG CCGCGAGGCG
ATCCGGGCGA TCAAGACCCA CAAGCCCGAC CTCGTCTTCC TCGACATCCA GATGCCCGGA
TTCGACGGCT TCTCCGTGAT CCAGGGGCTG ATGGAGGTCG AGCCGCCGCT GTTCGTCTTC
TGCACCGCCT ATGAGGATCA CGCGATCCGC GCCTTCCAGG CGCAGGCGCT CGACTATCTG
CTCAAGCCCG TCGACGAGCA GCGGCTGGCC GACACGCTCG ACCGCGTGCG CCAGCGCCTC
GCCGAGAAGA AGGGCGTCGA GGAGGTCGGC CGGCTCAAGG AGGTGCTCGC CGAGGTCGCC
CCCGACGCGG CCGACAGCTA TGGCGAGAGC GACGACGCGC CCGCGTCGAA CCGCTTCGAG
AAGATGATCA ACATCAAGGA TCGCGGCCAG ATCTTCCGCG TCGACGTCGA CACGATCGAG
CGGATCGACG CCGCCGGCGA CTATATGTGC ATCTACACCG GCGACAACAC GCTGATCCTG
CGCGAGACGA TGAAGGACCT GGAGAAGCGG CTCGATCCGC GCCGCTTCCA GCGCGTCCAC
CGCTCGACGA TCGTCAATCT CGACCTGGTC CGCCAGGTCA AGCCGCACAC CAACGGCGAA
TGCTTCCTGG TGCTCGATTC GGGCGCGCAG GTGAAGGTCA GCCGCTCCTA TCGCGAGGTC
GTCGCGCGCT TCGTCCATTG A
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| Protein sequence | MTIRTILVDD EPLAIQGLRL RLAAHEDVEI IETCLNGREA IRAIKTHKPD LVFLDIQMPG
FDGFSVIQGL MEVEPPLFVF CTAYEDHAIR AFQAQALDYL LKPVDEQRLA DTLDRVRQRL
AEKKGVEEVG RLKEVLAEVA PDAADSYGES DDAPASNRFE KMINIKDRGQ IFRVDVDTIE
RIDAAGDYMC IYTGDNTLIL RETMKDLEKR LDPRRFQRVH RSTIVNLDLV RQVKPHTNGE
CFLVLDSGAQ VKVSRSYREV VARFVH
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