| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0420 |
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| Symbol | |
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| ID | 4069646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 487964 |
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| End bp | 488917 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637982424 |
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| Product | LytR/AlgR family transcriptional regulator |
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| Protein accession | YP_589499 |
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| Protein GI | 94967451 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0328897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0302219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA AAATCGCGCT CCGCGCGGCA TCCGCTTCAC AACCAGCAAC TTCTGTCCCT
GATAGTTCGC CGCTCGTCCC TCATTCCAGT GCACCGGATT TACTTCGTGT TTTCGCTGGG
ATAAGGTTCG AGCAACTCGG GAGGGAGCGA GTCGAAGTGG CAACCAATCC TGTCGTCGAC
TTGGAACTGC GCGCGGTCAT CGTAGAAGAT GAACCCCTCG CGACTATGAA GCTCAAGAAA
CTTCTCGATG GCGAGCCTGG CATTCGTGTG ATGGGCCACG CGGCAAACAT CGATGAGGCC
GTCGCTCAAA TTAGGAAGTT GCAGCCTAAC GTCATCTTTC TTGATGTTCA GCTTCCGGGC
GGTAGCGGTT TCGAAGTTCT CGATCGCCTG CCCGAAGCAA ACCGTCCCTG CATCATCTTT
ACGACCGCAT ACGACCAGTA CGCAATCAAG GCATTCGACC TCCATGCCGC CGACTACCTA
CTGAAGCCCT TCGACCAGGA ACGCCTCCAT CGCGCAATCG AAAAGGCTCG CGTTCAGGCT
GCGGGCCCGG TTGACAAGGA ATGGACCCAA AGGCTGGCGA AGCTGATCGA GACTCTGCCA
AAGAATGGGC GCAACCCCGA AGAACGTTTG GTTTTCAAGA GCGGCGGACG CGTACTATTC
CTGGAGCAGG ACGAAATCGA GTGGATTGAG GCGGCTTCCA ATTACGTCCA CATCCACTGC
GGCGGGAACG TGGTGCACTC TGTGCGCAAT ACCATTCGCG ACGTCGAGAC GCGGCTCAAT
CCTCTCAAAT TCATCCGCGT CCATCGTTCG ATCATCGTGA ACGTCAATCG GATTAAGGAA
CTCCAGCCCT GTAACAGTGG CGAGCATGTG GTGGTGATGA AGAGCGGAAA AGAACTTTCC
TGCAGCCGCA CGTATCGCAT GGCGATCGCC TCCATCACTC GCGAGCGGCT TTGA
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| Protein sequence | MQQKIALRAA SASQPATSVP DSSPLVPHSS APDLLRVFAG IRFEQLGRER VEVATNPVVD
LELRAVIVED EPLATMKLKK LLDGEPGIRV MGHAANIDEA VAQIRKLQPN VIFLDVQLPG
GSGFEVLDRL PEANRPCIIF TTAYDQYAIK AFDLHAADYL LKPFDQERLH RAIEKARVQA
AGPVDKEWTQ RLAKLIETLP KNGRNPEERL VFKSGGRVLF LEQDEIEWIE AASNYVHIHC
GGNVVHSVRN TIRDVETRLN PLKFIRVHRS IIVNVNRIKE LQPCNSGEHV VVMKSGKELS
CSRTYRMAIA SITRERL
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