| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6060 |
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| Symbol | |
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| ID | 8362242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7659096 |
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| End bp | 7659857 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968194 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003125673 |
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| Protein GI | 256425020 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAC TGATCATCGA AGATGAGATC AAAGCAGCTA CCTCGCTGGC TACACTGATC
GGCAAAATAA AGCCGGAAGC CCGTATCGTA GCACAACTGC AAAGCGTAAA AAGCAGCGTC
GCCTGGTTGT CAGAACATGA ACAACCAGAC CTGATCTTCA TGGATATACA GCTGTCCGAC
GGACTAAGTT TCAACATCTT CAAAACAGCT AAAGTATCCG CACCCGTGGT ATTCTGTACC
GCATATGACG AATATACCCT GGAAGCATTC AAGGCAAACG GCGTTGACTA TGTACTGAAA
CCTTTCTCTC AGCAGGACAT TGAAAACGCC TTTAAAAAGG TAGACGAACT GAAGAACTTT
TTTCAGCAGA ATCCCCTCCC GCAGTTAAAC GATCTGCTGG CGAAAGTCGC AGGTACCGCC
GGTAAGAAAA ACTTCCTGGT CTTTAAGCAG AACAAATACC TCAATATCGC AACCGATACA
ATCGCCTTTT TCTATATCAA ACACGAAGCG ACCATGATCA AAACCTTTGA TCAGCAGGAA
TACAGCATAA ACCAGTCGCT CGATCAGATC TATAGTCTGC TGGCGCCGGA ACAGTTCTTC
CGGCTGAACA GACAATACCT TGTCAATTTC CATGCAGTAA AAGAAGTAGA ACACTACTTT
GCGCGAAAAC TGCTGGTTAC CCTAAGCATT CCAACACCTG AGAAATTATT GGTCAATAAG
GAAAAAGTAC AGAACTTCCT GACCTGGATG GAGAACCGGT AA
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| Protein sequence | MNILIIEDEI KAATSLATLI GKIKPEARIV AQLQSVKSSV AWLSEHEQPD LIFMDIQLSD
GLSFNIFKTA KVSAPVVFCT AYDEYTLEAF KANGVDYVLK PFSQQDIENA FKKVDELKNF
FQQNPLPQLN DLLAKVAGTA GKKNFLVFKQ NKYLNIATDT IAFFYIKHEA TMIKTFDQQE
YSINQSLDQI YSLLAPEQFF RLNRQYLVNF HAVKEVEHYF ARKLLVTLSI PTPEKLLVNK
EKVQNFLTWM ENR
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