| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3838 |
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| Symbol | |
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| ID | 4071122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4541893 |
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| End bp | 4542657 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637985861 |
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| Product | LytR/AlgR family transcriptional regulator |
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| Protein accession | YP_592912 |
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| Protein GI | 94970864 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.479778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCTG CGCCCATTCG GGTGATCACC GTGGACGACG AACCCTTCGC GCTGCAACGG
ATTTCTCGTC TGGTGCGGGA GGAGCCCTCC TTGTCGCTGG TTGCTGAGTG TTCGTCGGCC
GCAAGCGCCA TCGAGAGTAT TTGCGAGCTT CGTCCGCAGG TTGTGTTTCT CGATGTGCAG
ATGCCCGAAG TGGATGGCTT CGGAGTGCTC GATGCCTTCC AGGGTCCTAC GCTTCCCTGG
GTGGTATTTA CGACGGCGTA CGAGGAGTAC GCTGTCCGCG CGTTCGAGGC GAGCGCGGTG
GATTACCTGC TGAAACCGAT CAGCCAGGAA CGTTTTTCGG CGGCCGTCGG GAAACTCAAG
ACCGCAGCCA ATTCCGTAGG CACGTCCAAT GCCCGGTCGG GTCTGGACGC TTCGCGTTAC
GAGCGGATCC TGATCAAGAC GGATGGAAAG TTTGTGATGC TGGATCCGGG GCAAGTAGAA
CGAATTTCTG CGGCCGGAAA TTATGCCATC GTGTATGCCG CCGGGAAGTC TTACATCATT
CGCGAAACCA TGACGCGGAT CCAATGTCGC GTTGACCCGC GTCGGTTCTT TCGAGTCAAT
CGGTCTGAGA TTGTGAATCT CTCGTTCGTT CAGGAATTAG AACCGACGTG CCATGGAGAG
TATTCGATCA CCACGATTTT CGGCACGAAA GTCACTCTCA CAAGGACCTA CCGCGATGCG
TTGCAACGCA TGCTTTCCAT GACTCGTTCG GGAACCAGGG TGTAG
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| Protein sequence | MSPAPIRVIT VDDEPFALQR ISRLVREEPS LSLVAECSSA ASAIESICEL RPQVVFLDVQ
MPEVDGFGVL DAFQGPTLPW VVFTTAYEEY AVRAFEASAV DYLLKPISQE RFSAAVGKLK
TAANSVGTSN ARSGLDASRY ERILIKTDGK FVMLDPGQVE RISAAGNYAI VYAAGKSYII
RETMTRIQCR VDPRRFFRVN RSEIVNLSFV QELEPTCHGE YSITTIFGTK VTLTRTYRDA
LQRMLSMTRS GTRV
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