| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1542 |
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| Symbol | |
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| ID | 8252644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1828936 |
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| End bp | 1829673 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935196 |
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| Product | LytTr DNA-binding region |
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| Protein accession | YP_003091817 |
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| Protein GI | 255531445 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.300206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAGAA CGATATTAAT TGATGATGAA CCTTTAGCAA GAGATGTGGT GAAACACTAT
TTGAAGCTTT TTCCGGAAGT AGAGGTAGTG GCCGAATGCA GTGATGGTTT TGAAGGGATA
AAAGCCATTG CACATCATCA GCCTGATTTT ATTTTTCTGG ATATCCAGAT GCCTAAAATC
AGTGGTTTTG AAATGCTGGA ACTGGTAGAG AAGCATCCGG CAGTAATATT TACTACTGCT
TTTGATGAAT ATGCAATTAA AGCCTTTGAG GTAAATGCTG TAGATTATTT ACTGAAACCG
ATAGAGCAGA ACCGATTTGA GCAGGCGATG CAGAAACTGC CGGGACGATT ACACAATACA
GATGCAGTTA CAAAGGAGTT GCTGGATGTG GCTGCTTTGA GTCCTGCCCA GCACAACAGG
GTGGTGGTTA AAAAAAACGG AGTGATCAAA ATTATTGCCG TATCGGATAT TCATTATTTA
GAGGCTGATG ATGATTATGT GAAACTGAGT ACCGCTGAAG GGATTTATCA TAAAAATAAA
ACGATGAACT TTTTTGAAAG GACATTGGAG CCCGGACAGT TTATTCGTAT TCACAGGTCG
TACATCATCA ATCTTGCCCA GGTTACCAGA ATCGAATTGA AGGAAAAAGA CAGTTATGTA
GTATTGCTGA AATCAGATAT CTGGCTGCCG GTAAGCAAAA CCGGCTATGT GAAATTGAAA
GCAGCCCTGG GTATGTAG
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| Protein sequence | MIRTILIDDE PLARDVVKHY LKLFPEVEVV AECSDGFEGI KAIAHHQPDF IFLDIQMPKI
SGFEMLELVE KHPAVIFTTA FDEYAIKAFE VNAVDYLLKP IEQNRFEQAM QKLPGRLHNT
DAVTKELLDV AALSPAQHNR VVVKKNGVIK IIAVSDIHYL EADDDYVKLS TAEGIYHKNK
TMNFFERTLE PGQFIRIHRS YIINLAQVTR IELKEKDSYV VLLKSDIWLP VSKTGYVKLK
AALGM
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