| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6586 |
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| Symbol | |
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| ID | 8362774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8261607 |
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| End bp | 8262347 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644968718 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003126191 |
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| Protein GI | 256425538 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.318104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAG CAGTAATAAT TGATGATGAA CCCCTGGCGC GTGAGATTGT AAAAGAATAT
CTCCAGTCCT TCTCTCAGAT ACAACTGATG CAGGAGTGTG GAGATGGTTT TGAAGGATTG
AAAGCCATAC AGCAGCAACA ACCCGATATC ATTTTTCTCG ATGTACAGAT GCCCAAAATC
AATGGCTTTG AAATGCTGGA ACTCGTGGAA TCATTGCCCG CGGTTATATT CACCACTGCT
TTTGAAGAAC ATGCCATCCG CGCATTTGAA GTGAATGCCA TCGACTATTT GTTGAAGCCT
TTTTCAAAAG AACGTTTTGA TAAAGCAGTC TCCAAATGGC TGGACCGTCG TGTAGCAGAT
GAAATGCAGC AGACTGCCGC TTTGCTGGAC ACAGCAGGTG CATCTCCTAT GCAGAGTAAC
AGGGTAGTCG TAAAGATCAA CGGTAAGATC AAGATCATTC CTGTACAGGA TATACACTAT
CTCGAAGCAG CAGATGATTA TGTAAAGATC GTTACACCGG AAGGTACCTT CCTTAAAAAT
AAGACAATGC AGTTCTTCGA GAAATCGCTG GACCCGCAAC AGTTTGCCCG CGTACACCGC
TCTTATATGC TCAATGTAAA TCAGGTGACG CGTATCGAGC CATATGAAAA AGAAAATCAT
CTGGCTATAT TGAAATCGGG TGCGAAAGTA CCAGTTAGTA AGACAGGTTA TCCCAGGCTG
AAAGCATCAC TGGGATTGTA A
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| Protein sequence | MIKAVIIDDE PLAREIVKEY LQSFSQIQLM QECGDGFEGL KAIQQQQPDI IFLDVQMPKI
NGFEMLELVE SLPAVIFTTA FEEHAIRAFE VNAIDYLLKP FSKERFDKAV SKWLDRRVAD
EMQQTAALLD TAGASPMQSN RVVVKINGKI KIIPVQDIHY LEAADDYVKI VTPEGTFLKN
KTMQFFEKSL DPQQFARVHR SYMLNVNQVT RIEPYEKENH LAILKSGAKV PVSKTGYPRL
KASLGL
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