| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6623 |
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| Symbol | |
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| ID | 8362811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8305796 |
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| End bp | 8306572 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644968755 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003126228 |
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| Protein GI | 256425575 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0991065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.080317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA TTAAAGCAAT CATCGTTGAT GATGAGCAAC ACTGTATAGA TGCTCTTCAG
ACAATGCTTC AGAAGAAATG TCCGGAGGTG ACTGTCCTGG GAGGCGTGAA TAGTGTAAAG
GAAGCAAAGG AACTGATAAC GGAATTACAG CCGGATGTTG TGTTCCTCGA TGTGGAAATG
CCACATCAGA ATGGCTTTGA GTTGCTGAAA ATGTTCGATA AGATCACTTT TGATGTAATA
TTCACTACTG CCTATGAACA GTACGCCCTG AAAGCAATCA AGTTCAATGC ACTGGACTAC
CTGTTGAAAC CTTTCAGTGT GAAAGAGTTA CAGGATGCTA TCCAGAAATG TATCGCCCGT
CGCAGCAGTA ACACCGGCAA TGGACAACCG GAGATGACCA CTTCTCCCAT CGAAGTGTTC
CTCCAGAATA TGAAAACGCT GCATCAGACA CATAAGAAAA TAGCGCTCCC AACCATTAAC
GGACTGGTTT TTATGCCGGT ACAGAATATA GTACGCTGCG AATCGACCGG CAACTATACC
CGTATCTTTT TTACAGATAA AAAGAACCTC ATGGTATCCA GACCGTTAAA GGAATTTGAG
GAGCTGTTAA CGGATGTAGA TTTTTTCAGG GTGCATAATT CACACCTGAT CAATTTACAG
CAGATGCAAT CTTATATACA GGGTGAGGGC GGTTTTGCAC TGATGAGTGA CGGTACGCAG
GTGGAAATTT CACGAAGAAG GAAGGCCGAT TTCCTGAAAA AAGCGATGCA GTTCTAA
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| Protein sequence | MSEIKAIIVD DEQHCIDALQ TMLQKKCPEV TVLGGVNSVK EAKELITELQ PDVVFLDVEM
PHQNGFELLK MFDKITFDVI FTTAYEQYAL KAIKFNALDY LLKPFSVKEL QDAIQKCIAR
RSSNTGNGQP EMTTSPIEVF LQNMKTLHQT HKKIALPTIN GLVFMPVQNI VRCESTGNYT
RIFFTDKKNL MVSRPLKEFE ELLTDVDFFR VHNSHLINLQ QMQSYIQGEG GFALMSDGTQ
VEISRRRKAD FLKKAMQF
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