| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1246 |
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| Symbol | |
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| ID | 5452452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1344492 |
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| End bp | 1345256 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640875022 |
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| Product | LytTR family two component transcriptional regulator |
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| Protein accession | YP_001410750 |
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| Protein GI | 154249925 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGTG TAATTGTCGA AGATGAAAAA TTACTTGCGA TGGTGCTCGA AAAAATGCTG
AAAGAAGAAG GGATAGAAGT TCTTGGATGG GCTGATAATG TAGATGAAGG AATTAGATTG
GTTGACGAAC TTAAGCCAGA CGTGCTTTTC TTGGATATAA ACTTAGGTGA TAAGGATGGG
TTCTATCTGC TTAGCAAGAT TAATCATAAA CCATACGTAG TTTTCGTAAC AGCCTATTCG
GAATATGCAG TTAAAGCATT TGAAAGGAAT GCTATTGATT ATATTTTAAA ACCAGTTAGT
AGGGAGAGAT TGAAAAACGC AATCGATAAG GTTAGTAAGG CAATAGAATC GAAAAAATTA
AATGAGAACT ATCAAGATTT CATAGAGGAA AAAATTAGAA GCATGCTTGA AAGATTGTCT
TACGATTTAT CGAACTTACA AAAAAAAATA CCTATCGAAA CTGAAAATGA GATAGTACTT
GTAAATTGCG ATGATATAAT TTTATTTCAA GCAAGTGAAG GATTGACGGT AGTTAATTTA
AAACAAGGCA TTCTTAAAAC AAAGACTCCT TTGAAAGAGT TTGAAGCGAA ATTGTCGAAA
GACAAATTTA TACGTGTGCA TAAGTCTTAT ATTATTTCGA TAAACGCAGT TAAAAAAATT
TTGAAAAACT ATATTGGAGG TTTAGCGATA GAGCTCATAA ATGGGAATAT AATACCGGTT
GGAAGAATGT ATAAAGAAAA TATAAAGAAA ATTATAGATA CTTAG
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| Protein sequence | MKCVIVEDEK LLAMVLEKML KEEGIEVLGW ADNVDEGIRL VDELKPDVLF LDINLGDKDG
FYLLSKINHK PYVVFVTAYS EYAVKAFERN AIDYILKPVS RERLKNAIDK VSKAIESKKL
NENYQDFIEE KIRSMLERLS YDLSNLQKKI PIETENEIVL VNCDDIILFQ ASEGLTVVNL
KQGILKTKTP LKEFEAKLSK DKFIRVHKSY IISINAVKKI LKNYIGGLAI ELINGNIIPV
GRMYKENIKK IIDT
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