Gene EcolC_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1522 
Symbol 
ID6066924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1682032 
End bp1682751 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID641600941 
Productputative two-component response-regulatory protein YehT 
Protein accessionYP_001724511 
Protein GI170019557 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG TCTTAATTGT CGATGATGAA CCGTTAGCAC GGGAGAACCT GCGCGTATTT 
TTGCAGGAGC AGAGCGATAT TGAAATCGTT GGTGAGTGTT CAAACGCCGT GGAAGGGATC
GGCGCGGTGC ATAAACTGCG CCCGGATGTG CTGTTTCTCG ATATCCAGAT GCCGCGCATC
AGTGGTCTGG AAATGGTGGG GATGCTCGAC CCGGAACATC GTCCGTATAT TGTTTTTCTC
ACCGCGTTTG ACGAATACGC CATTAAAGCC TTTGAAGAAC ACGCCTTTGA TTATCTGCTG
AAGCCAATTG ATGAAGCGCG ACTGGAGAAA ACGCTGGCGC GTTTGCGGCA GGAACGCAGC
AAGCAGGATG TTTCGCTGTT ACCAGAAAAT CAACAGGCGC TGAAATTTAT CCCTTGTACT
GGGCATAGTC GGATTTATTT GCTGCAAATG AAAGATGTGG CATTTGTCAG CAGTCGGATG
AGCGGTGTCT ACGTTACCAG CCACGAAGGG AAAGAGGGCT TTACCGAATT GACATTACGT
ACCCTGGAAA GTCGTACACC ACTACTGCGC TGCCATCGTC AGTATCTGGT TAACCTCGCG
CATTTACAGG AGATTCGTCT GGAAGATAAC GGCCAGGCCG AGTTGATTTT GCGTAATGGC
TTAACCGTGC CGGTCAGCCG CCGTTATCTG AAAAGCTTAA AAGAGGCGAT TGGCCTGTAA
 
Protein sequence
MIKVLIVDDE PLARENLRVF LQEQSDIEIV GECSNAVEGI GAVHKLRPDV LFLDIQMPRI 
SGLEMVGMLD PEHRPYIVFL TAFDEYAIKA FEEHAFDYLL KPIDEARLEK TLARLRQERS
KQDVSLLPEN QQALKFIPCT GHSRIYLLQM KDVAFVSSRM SGVYVTSHEG KEGFTELTLR
TLESRTPLLR CHRQYLVNLA HLQEIRLEDN GQAELILRNG LTVPVSRRYL KSLKEAIGL