More than 300 homologs were found in PanDaTox collection
for query gene Smal_0617 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_0617  two component transcriptional regulator, LytTR family  100 
 
 
243 aa  476  1e-133  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.23864 
 
 
-
 
NC_013132  Cpin_0374  two component transcriptional regulator, LytTR family  47.08 
 
 
242 aa  223  1e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1527  LytTR family two component transcriptional regulator  50 
 
 
246 aa  219  3.9999999999999997e-56  Opitutus terrae PB90-1  Bacteria  normal  0.109257  normal 
 
 
-
 
NC_013037  Dfer_5142  two component transcriptional regulator, LytTR family  43.67 
 
 
244 aa  209  3e-53  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.546377  normal 
 
 
-
 
NC_013730  Slin_2906  two component transcriptional regulator, LytTR family  44.98 
 
 
245 aa  209  5e-53  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3733  response regulator receiver domain-containing protein  36.95 
 
 
249 aa  180  2e-44  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.766169 
 
 
-
 
NC_007912  Sde_3000  response regulator receiver domain-containing protein  34.06 
 
 
229 aa  165  5.9999999999999996e-40  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.000248508 
 
 
-
 
NC_013132  Cpin_5734  two component transcriptional regulator, LytTR family  38.11 
 
 
257 aa  148  9e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_2673  response regulator receiver protein  36.86 
 
 
268 aa  142  6e-33  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.587227  normal  0.606797 
 
 
-
 
NC_008009  Acid345_3291  LytR/AlgR family transcriptional regulator  35.54 
 
 
258 aa  141  8e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.393667  normal 
 
 
-
 
NC_007912  Sde_0480  response regulator receiver domain-containing protein  33.59 
 
 
265 aa  140  1.9999999999999998e-32  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2974  LytTR family two component transcriptional regulator  36.61 
 
 
266 aa  140  1.9999999999999998e-32  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.318128 
 
 
-
 
NC_013170  Ccur_01160  response regulator of the LytR/AlgR family  37.04 
 
 
238 aa  139  4.999999999999999e-32  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5573  response regulator LytR  33.33 
 
 
246 aa  137  1e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0227  LytR/AlgR family transcriptional regulator  35.18 
 
 
265 aa  137  1e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.312706  n/a   
 
 
-
 
NC_011658  BCAH187_A5621  response regulator LytR  33.33 
 
 
246 aa  137  2e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5384  response regulator LytR  34.71 
 
 
246 aa  137  2e-31  Bacillus cereus G9842  Bacteria  normal  0.662493  normal  0.485514 
 
 
-
 
NC_009674  Bcer98_3958  LytTR family two component transcriptional regulator  32.93 
 
 
246 aa  137  2e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0979  LytTR family two component transcriptional regulator  38.17 
 
 
242 aa  136  3.0000000000000003e-31  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0238694 
 
 
-
 
NC_010184  BcerKBAB4_5234  LytTR family two component transcriptional regulator  32.64 
 
 
246 aa  136  3.0000000000000003e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0067  LytTR family two component transcriptional regulator  36.36 
 
 
268 aa  135  5e-31  Opitutus terrae PB90-1  Bacteria  normal  0.169577  normal  0.169612 
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  35.5 
 
 
260 aa  135  5e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal 
 
 
-
 
NC_011773  BCAH820_5536  response regulator LytR  33.88 
 
 
246 aa  134  9e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS5295  response regulator LytR  33.88 
 
 
246 aa  134  9e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5122  response regulator  33.88 
 
 
246 aa  134  9e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5691  response regulator LytR  33.88 
 
 
246 aa  134  9e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5565  response regulator LytR  34.3 
 
 
246 aa  134  9.999999999999999e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5137  response regulator  32.93 
 
 
246 aa  134  9.999999999999999e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0119  response regulator receiver protein  38.11 
 
 
249 aa  134  1.9999999999999998e-30  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1761  two component transcriptional regulator, LytTR family  36.33 
 
 
251 aa  132  6.999999999999999e-30  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0190  LytR/AlgR family transcriptional regulator  37.5 
 
 
244 aa  131  9e-30  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.625509  n/a   
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  36.72 
 
 
266 aa  131  9e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2385  response regulator receiver protein  30.38 
 
 
272 aa  131  9e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_00400  response regulator of the LytR/AlgR family  35.8 
 
 
237 aa  131  1.0000000000000001e-29  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.132657  normal 
 
 
-
 
NC_013440  Hoch_4801  two component transcriptional regulator, LytTR family  36.51 
 
 
240 aa  130  1.0000000000000001e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.154299  normal 
 
 
-
 
NC_013061  Phep_1542  LytTr DNA-binding region  31.56 
 
 
245 aa  130  2.0000000000000002e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.300206 
 
 
-
 
NC_009513  Lreu_0904  LytTR family two component transcriptional regulator  29.22 
 
 
243 aa  129  3e-29  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3159  response regulator receiver  31.74 
 
 
242 aa  129  4.0000000000000003e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0036  LytR/AlgR family transcriptional regulator  38.06 
 
 
248 aa  129  4.0000000000000003e-29  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4408  two component transcriptional regulator, LytTR family  33.46 
 
 
268 aa  129  4.0000000000000003e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  34.44 
 
 
237 aa  129  4.0000000000000003e-29  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  34.71 
 
 
253 aa  129  5.0000000000000004e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal 
 
 
-
 
NC_013204  Elen_0137  two component transcriptional regulator, LytTR family  34.98 
 
 
237 aa  128  7.000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6623  two component transcriptional regulator, LytTR family  31.62 
 
 
258 aa  128  9.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0991065  normal  0.080317 
 
 
-
 
NC_007519  Dde_0161  LytR/AlgR family transcriptional regulator  32.22 
 
 
270 aa  128  1.0000000000000001e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0055  LytTR family two component transcriptional regulator  33.74 
 
 
243 aa  127  2.0000000000000002e-28  Shewanella baltica OS185  Bacteria  normal  0.868518  n/a   
 
 
-
 
NC_008740  Maqu_0488  response regulator receiver protein  37.39 
 
 
252 aa  126  3e-28  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0469  response regulator receiver protein  32.94 
 
 
254 aa  126  4.0000000000000003e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2356  response regulator receiver protein  35.66 
 
 
257 aa  125  5e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.325932  normal  0.149931 
 
 
-
 
NC_009483  Gura_2791  LytTR family two component transcriptional regulator  37.55 
 
 
250 aa  125  5e-28  Geobacter uraniireducens Rf4  Bacteria  normal  0.073585  n/a   
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  29.63 
 
 
275 aa  125  5e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_008009  Acid345_1001  LytR/AlgR family transcriptional regulator  32.95 
 
 
262 aa  125  8.000000000000001e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0103069 
 
 
-
 
NC_011663  Sbal223_0059  two component transcriptional regulator, LytTR family  33.33 
 
 
243 aa  125  8.000000000000001e-28  Shewanella baltica OS223  Bacteria  normal  0.182784  normal 
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  32.4 
 
 
252 aa  124  1e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
NC_009997  Sbal195_0060  LytTR family two component transcriptional regulator  33.33 
 
 
243 aa  124  1e-27  Shewanella baltica OS195  Bacteria  normal  0.0478076  hitchhiker  0.000497336 
 
 
-
 
NC_009052  Sbal_4299  LytTR family two component transcriptional regulator  33.33 
 
 
243 aa  124  1e-27  Shewanella baltica OS155  Bacteria  decreased coverage  0.000001386  n/a   
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  35.74 
 
 
255 aa  124  1e-27  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_008009  Acid345_3838  LytR/AlgR family transcriptional regulator  30.71 
 
 
254 aa  123  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.479778 
 
 
-
 
NC_008009  Acid345_0420  LytR/AlgR family transcriptional regulator  31.95 
 
 
317 aa  123  3e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0328897  normal  0.0302219 
 
 
-
 
NC_008321  Shewmr4_0057  response regulator receiver protein  32.92 
 
 
243 aa  123  3e-27  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000048418  decreased coverage  0.0000000648872 
 
 
-
 
NC_008322  Shewmr7_0055  response regulator receiver protein  32.92 
 
 
243 aa  123  3e-27  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000989316  hitchhiker  0.000468323 
 
 
-
 
NC_010506  Swoo_4846  LytTR family two component transcriptional regulator  32.53 
 
 
246 aa  123  3e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.568582  normal 
 
 
-
 
NC_010571  Oter_3913  LytTR family two component transcriptional regulator  36.08 
 
 
268 aa  122  5e-27  Opitutus terrae PB90-1  Bacteria  normal  0.316099  normal 
 
 
-
 
NC_013501  Rmar_2186  two component transcriptional regulator, LytTR family  33.58 
 
 
275 aa  122  6e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0671  two component transcriptional regulator, LytTR family  33.07 
 
 
251 aa  122  7e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  34.27 
 
 
239 aa  121  8e-27  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6586  two component transcriptional regulator, LytTR family  28.86 
 
 
246 aa  121  9e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.318104  normal 
 
 
-
 
NC_011769  DvMF_1224  two component transcriptional regulator, LytTR family  37.12 
 
 
260 aa  119  3.9999999999999996e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0890711 
 
 
-
 
NC_008255  CHU_0254  response regulator  30.74 
 
 
251 aa  119  3.9999999999999996e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.437869  normal 
 
 
-
 
NC_013173  Dbac_2397  two component transcriptional regulator, LytTR family  34.55 
 
 
261 aa  119  4.9999999999999996e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0957  putative two-component response-regulatory protein YehT  32.92 
 
 
241 aa  119  4.9999999999999996e-26  Dickeya dadantii Ech703  Bacteria  normal  0.147856  n/a   
 
 
-
 
NC_013061  Phep_1585  LytTr DNA-binding region  30.56 
 
 
259 aa  118  7e-26  Pedobacter heparinus DSM 2366  Bacteria  normal  0.80455  normal  0.0356965 
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  32.66 
 
 
239 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal 
 
 
-
 
NC_010814  Glov_3544  two component transcriptional regulator, LytTR family  33.06 
 
 
251 aa  118  9e-26  Geobacter lovleyi SZ  Bacteria  normal  0.0394969  n/a   
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  32.66 
 
 
239 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  32.66 
 
 
239 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  32.66 
 
 
239 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  32.66 
 
 
239 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1964  LytR/AlgR family transcriptional regulator  32.53 
 
 
255 aa  117  9.999999999999999e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.777054 
 
 
-
 
NC_011312  VSAL_I1318  putative two-component response-regulatory protein YehT  29.63 
 
 
238 aa  117  9.999999999999999e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00984  putative two-component response-regulatory protein YehT  31.85 
 
 
242 aa  118  9.999999999999999e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_2328  LytTR family two component transcriptional regulator  37.4 
 
 
255 aa  117  1.9999999999999998e-25  Opitutus terrae PB90-1  Bacteria  normal  0.261765  decreased coverage  0.00199939 
 
 
-
 
NC_013037  Dfer_1004  two component transcriptional regulator, LytTR family  32.5 
 
 
257 aa  117  1.9999999999999998e-25  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.00878343  normal  0.279198 
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  30.89 
 
 
238 aa  116  3e-25  Yersinia pestis Angola  Bacteria  normal  normal  0.159726 
 
 
-
 
NC_013730  Slin_3594  two component transcriptional regulator, LytTR family  35.98 
 
 
260 aa  116  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  0.833136  normal  0.0457058 
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  31.98 
 
 
238 aa  116  3e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0765  LytR/AlgR family transcriptional regulator  29.53 
 
 
247 aa  116  3e-25  Psychrobacter cryohalolentis K5  Bacteria  normal  0.584976  normal  0.255142 
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  30.89 
 
 
238 aa  116  3e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  33.33 
 
 
241 aa  115  3.9999999999999997e-25  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_013456  VEA_004414  response regulator of the LytR/AlgR family  33.06 
 
 
242 aa  115  5e-25  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1130  putative two-component response-regulatory protein YehT  31.95 
 
 
238 aa  115  5e-25  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0898  two component transcriptional regulator, LytTR family  33.07 
 
 
265 aa  115  6e-25  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0357  response regulator receiver  37.82 
 
 
249 aa  115  6e-25  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0704  LytTR family two component transcriptional regulator  29.92 
 
 
276 aa  115  7.999999999999999e-25  Opitutus terrae PB90-1  Bacteria  normal  normal  0.674394 
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  31.85 
 
 
239 aa  115  7.999999999999999e-25  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02012  hypothetical protein  31.85 
 
 
239 aa  114  1.0000000000000001e-24  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0919  putative two-component response-regulatory protein YehT  31.85 
 
 
239 aa  114  1.0000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2413  putative two-component response-regulatory protein YehT  31.85 
 
 
239 aa  114  1.0000000000000001e-24  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1522  putative two-component response-regulatory protein YehT  31.85 
 
 
239 aa  114  1.0000000000000001e-24  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2259  putative two-component response-regulatory protein YehT  31.85 
 
 
239 aa  114  1.0000000000000001e-24  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
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