| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2434 |
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| Symbol | |
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| ID | 4279345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2897519 |
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| End bp | 2898229 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135230 |
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| Product | putative two-component response-regulatory protein YehT |
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| Protein accession | YP_751117 |
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| Protein GI | 114563604 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.318628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCGT GCTTAATCAT TGATGATGAA CCCTTCGCCC GCCAAGAAGT GGCAGATTTG
CTCGACAAAC ATCCTGACAT CAAAGTGTTA GGTCAATGTA GTAATGCCAT AGAAGCCTTA
CAACAAATTA ACCTGTTAAA GCCTGATTTG ATTTTTGTTG ATATTCAAAT GCCGAGGATA
AATGGCATGG AATTAATTGC CATGCTTAAT CCTGAGCAAA TGCCACGAGC AGTATTTATT
ACCGCATTTG ACGAATATGC GATCAAAGCA TTTGATAACA ATGCATTTGA TTACTTACTT
AAACCCATCG ATGAAAAGCG CTTTAACCAA ACCTTAGACA AAGTACGCAC CAACATGACA
CCGCAACCAA TGACGCAGAT ATTGCCAACT CAATTAGCGC ACTTACCCTG CTACAGTGGC
AATAAACTTA AAGTTGTCGC TACCGCTGAT GTAGAGTTTA TTGTCAGTGA TGTTGGCGGT
ATTCATGTGT GTTCAAATAA AGGTTTCAGT CACACTCAAT TAACGCTAAA AGTATTAGAG
CAAAAAACCG CGTTATTTCG TTGCCATAAA CAATACCTAC TGGCCCCGAG TGCTATTTCA
GAAATTGAAA TCACCGACAC GGGCGCAGAA GTTACCACCC ATAGCGGATC AAAAGTGCCG
GTGTCACGTC GTTATCTTAG AGAGTTAAAG CAGTTGCTTG GATTTCAGTA A
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| Protein sequence | MISCLIIDDE PFARQEVADL LDKHPDIKVL GQCSNAIEAL QQINLLKPDL IFVDIQMPRI
NGMELIAMLN PEQMPRAVFI TAFDEYAIKA FDNNAFDYLL KPIDEKRFNQ TLDKVRTNMT
PQPMTQILPT QLAHLPCYSG NKLKVVATAD VEFIVSDVGG IHVCSNKGFS HTQLTLKVLE
QKTALFRCHK QYLLAPSAIS EIEITDTGAE VTTHSGSKVP VSRRYLRELK QLLGFQ
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