More than 300 homologs were found in PanDaTox collection
for query gene Rcas_3679 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3679  Crp/FNR family transcriptional regulator  100 
 
 
216 aa  437  9.999999999999999e-123  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.170413  normal  0.193267 
 
 
-
 
NC_009523  RoseRS_4027  cyclic nucleotide-binding protein  83.8 
 
 
216 aa  367  1e-100  Roseiflexus sp. RS-1  Bacteria  normal  0.357709  normal 
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  52.29 
 
 
218 aa  216  2e-55  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  35.08 
 
 
227 aa  110  1.0000000000000001e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_011831  Cagg_0349  transcriptional regulator, Crp/Fnr family  38.95 
 
 
222 aa  108  4.0000000000000004e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00000192919 
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  36.65 
 
 
228 aa  105  4e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  31.22 
 
 
267 aa  94.4  1e-18  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  27.18 
 
 
231 aa  91.7  8e-18  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  31.68 
 
 
230 aa  85.5  6e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  31.25 
 
 
225 aa  84.3  0.000000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  33.33 
 
 
228 aa  83.6  0.000000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  26.84 
 
 
231 aa  82.4  0.000000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  30.53 
 
 
236 aa  81.6  0.000000000000008  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  28.04 
 
 
225 aa  80.9  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  27.6 
 
 
228 aa  80.1  0.00000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  29.56 
 
 
234 aa  79.3  0.00000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  28.04 
 
 
225 aa  79.3  0.00000000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  26.63 
 
 
223 aa  79.3  0.00000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  28.04 
 
 
224 aa  78.2  0.00000000000009  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.34 
 
 
242 aa  78.2  0.00000000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  28.87 
 
 
223 aa  77.4  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  27.45 
 
 
225 aa  77.8  0.0000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  27.51 
 
 
222 aa  76.6  0.0000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  27.32 
 
 
234 aa  77  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  28.34 
 
 
229 aa  75.5  0.0000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_007298  Daro_1089  Crp/FNR family transcriptional regulator  30.22 
 
 
218 aa  75.1  0.0000000000007  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.3876 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  27.27 
 
 
226 aa  75.1  0.0000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  24.61 
 
 
243 aa  74.7  0.0000000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  22.46 
 
 
237 aa  74.3  0.000000000001  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  24.1 
 
 
352 aa  74.3  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  27.51 
 
 
224 aa  74.3  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  26.47 
 
 
225 aa  73.9  0.000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  29.28 
 
 
232 aa  73.9  0.000000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  27.51 
 
 
225 aa  73.6  0.000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  25.65 
 
 
226 aa  73.9  0.000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  28.04 
 
 
226 aa  73.6  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  30.69 
 
 
254 aa  73.9  0.000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  25.13 
 
 
227 aa  73.9  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  27.14 
 
 
226 aa  73.9  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  24.02 
 
 
227 aa  73.9  0.000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  26.2 
 
 
223 aa  73.2  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  26.94 
 
 
232 aa  72.8  0.000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  26.04 
 
 
224 aa  73.2  0.000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  23.81 
 
 
225 aa  73.2  0.000000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  27.27 
 
 
226 aa  72.4  0.000000000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  28.73 
 
 
232 aa  72  0.000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  31.64 
 
 
230 aa  72  0.000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  24.47 
 
 
228 aa  72.4  0.000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  26.84 
 
 
228 aa  71.6  0.000000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  26.94 
 
 
225 aa  71.6  0.000000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  24.88 
 
 
239 aa  71.6  0.000000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  26.98 
 
 
221 aa  71.6  0.000000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  27.62 
 
 
222 aa  71.6  0.000000000009  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  26.4 
 
 
227 aa  71.6  0.000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  23.04 
 
 
241 aa  71.2  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.04 
 
 
225 aa  70.9  0.00000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  26.32 
 
 
226 aa  71.2  0.00000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  25.64 
 
 
210 aa  71.2  0.00000000001  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4881  putative cyclic-AMP receptor-like protein  25.93 
 
 
281 aa  70.9  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal  0.139273 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  24.61 
 
 
225 aa  70.9  0.00000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  32.82 
 
 
238 aa  71.2  0.00000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  26.02 
 
 
225 aa  70.9  0.00000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  26.09 
 
 
234 aa  71.2  0.00000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  27.18 
 
 
220 aa  71.2  0.00000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  29.44 
 
 
226 aa  70.5  0.00000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  23.76 
 
 
227 aa  70.5  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  24.47 
 
 
235 aa  70.9  0.00000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  23.76 
 
 
227 aa  70.5  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  27.81 
 
 
224 aa  70.5  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  26.46 
 
 
225 aa  70.1  0.00000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  28.11 
 
 
239 aa  69.7  0.00000000003  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  26.46 
 
 
225 aa  70.1  0.00000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  26.47 
 
 
226 aa  69.3  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  24 
 
 
228 aa  69.7  0.00000000004  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  25.67 
 
 
223 aa  68.9  0.00000000005  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  21.26 
 
 
225 aa  68.9  0.00000000006  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  25.4 
 
 
225 aa  68.9  0.00000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  28.24 
 
 
236 aa  68.9  0.00000000006  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  25.93 
 
 
254 aa  68.9  0.00000000006  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  26.98 
 
 
226 aa  68.6  0.00000000007  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  25.93 
 
 
225 aa  68.6  0.00000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_1827  transcriptional regulator, Crp/Fnr family  26.98 
 
 
229 aa  68.2  0.00000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6723  putative cyclic-AMP receptor-like protein  27.23 
 
 
235 aa  68.2  0.00000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.823634  normal 
 
 
-
 
NC_013456  VEA_002279  cyclic AMP receptor protein  23.92 
 
 
210 aa  67.4  0.0000000001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  27.51 
 
 
218 aa  67.8  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  24.74 
 
 
217 aa  67.4  0.0000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  22.11 
 
 
229 aa  67.4  0.0000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  27.13 
 
 
224 aa  67  0.0000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  26.06 
 
 
224 aa  66.6  0.0000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  30.65 
 
 
249 aa  67  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  29.38 
 
 
224 aa  67  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_008309  HS_0139  cAMP-regulatory protein  25.36 
 
 
214 aa  67  0.0000000002  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  21.24 
 
 
228 aa  67  0.0000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  25.4 
 
 
254 aa  67.4  0.0000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  24.47 
 
 
222 aa  66.6  0.0000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  27.18 
 
 
243 aa  66.2  0.0000000003  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  28.93 
 
 
246 aa  66.6  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
NC_009429  Rsph17025_3237  hypothetical protein  24.54 
 
 
261 aa  66.6  0.0000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00075  cAMP-regulatory protein  23.92 
 
 
210 aa  66.6  0.0000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  27.18 
 
 
243 aa  66.2  0.0000000003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
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