208 homologs were found in PanDaTox collection
for query gene Psyc_0785 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007204  Psyc_0785  competence protein, ComEC  100 
 
 
986 aa  1995    Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0791  ComEC/Rec2-related protein  84.49 
 
 
1006 aa  1654    Psychrobacter cryohalolentis K5  Bacteria  normal  0.52274  normal 
 
 
-
 
NC_009524  PsycPRwf_1738  ComEC/Rec2-related protein  31.61 
 
 
1035 aa  355  2e-96  Psychrobacter sp. PRwf-1  Bacteria  normal  0.93623  normal  0.347072 
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  27.63 
 
 
948 aa  119  3e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  30.25 
 
 
832 aa  109  3e-22  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  27.31 
 
 
784 aa  108  4e-22  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  28.9 
 
 
747 aa  102  5e-20  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0600  DNA internalization-related competence protein ComEC/Rec2  29.27 
 
 
815 aa  101  9e-20  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.404851 
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  28.7 
 
 
860 aa  99  4e-19  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  25.94 
 
 
860 aa  95.1  6e-18  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  30.59 
 
 
845 aa  94.4  9e-18  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  27.53 
 
 
766 aa  92  5e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  26.03 
 
 
798 aa  91.7  6e-17  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  28.54 
 
 
833 aa  91.7  6e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  25.1 
 
 
802 aa  90.9  1e-16  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  28.15 
 
 
846 aa  90.9  1e-16  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  26.15 
 
 
772 aa  90.1  2e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  26.7 
 
 
825 aa  90.1  2e-16  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  27 
 
 
835 aa  89.7  2e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  28.67 
 
 
839 aa  89.7  3e-16  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  28.46 
 
 
878 aa  89.4  3e-16  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_008554  Sfum_1716  DNA internalization-related competence protein ComEC/Rec2  26.91 
 
 
846 aa  86.7  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.116279  normal  0.782454 
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  26.36 
 
 
851 aa  86.3  0.000000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_009674  Bcer98_3051  DNA internalization-related competence protein ComEC/Rec2  27.46 
 
 
780 aa  85.9  0.000000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.755952  n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  27.3 
 
 
840 aa  85.1  0.000000000000006  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  30.37 
 
 
861 aa  84.7  0.000000000000007  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  28.68 
 
 
819 aa  84.3  0.00000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  25.69 
 
 
801 aa  82.8  0.00000000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0680  hypothetical protein  25.79 
 
 
735 aa  82.8  0.00000000000003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  25 
 
 
770 aa  82  0.00000000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2449  DNA internalization-related competence protein ComEC/Rec2  29.75 
 
 
759 aa  81.6  0.00000000000006  Geobacillus sp. WCH70  Bacteria  normal  0.327807  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  25.92 
 
 
822 aa  81.6  0.00000000000006  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  27.39 
 
 
812 aa  80.1  0.0000000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  24.63 
 
 
801 aa  79.3  0.0000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_006369  lpl0663  hypothetical protein  25.79 
 
 
735 aa  79  0.0000000000005  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  26.3 
 
 
747 aa  78.6  0.0000000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  28.9 
 
 
801 aa  78.2  0.0000000000006  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  25.81 
 
 
839 aa  77.8  0.0000000000009  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  25.69 
 
 
847 aa  77  0.000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  25.84 
 
 
800 aa  77  0.000000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  27.17 
 
 
829 aa  75.5  0.000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  31.44 
 
 
765 aa  75.1  0.000000000007  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  26.81 
 
 
740 aa  75.1  0.000000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  27.18 
 
 
776 aa  74.7  0.000000000008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_011206  Lferr_0644  ComEC/Rec2-related protein  30.52 
 
 
700 aa  74.3  0.000000000009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.851772  normal 
 
 
-
 
NC_008309  HS_1022  recombination protein 2  26.95 
 
 
808 aa  73.9  0.00000000001  Haemophilus somnus 129PT  Bacteria  normal  0.949854  n/a   
 
 
-
 
NC_011761  AFE_0484  DNA internalization-related competence protein ComEC/Rec2  30.52 
 
 
736 aa  74.3  0.00000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  27.75 
 
 
799 aa  74.3  0.00000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  25.32 
 
 
840 aa  73.2  0.00000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  26.62 
 
 
833 aa  72.8  0.00000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_010320  Teth514_2092  DNA internalization-related competence protein ComEC/Rec2  25.34 
 
 
757 aa  72.8  0.00000000003  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000797686  n/a   
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  25.39 
 
 
758 aa  69.7  0.0000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  26.4 
 
 
752 aa  70.1  0.0000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  24.02 
 
 
752 aa  69.7  0.0000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013162  Coch_2101  ComEC/Rec2-related protein  24.46 
 
 
636 aa  68.6  0.0000000005  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.639499  n/a   
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  30.08 
 
 
793 aa  68.6  0.0000000006  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4445  DNA internalization-related competence protein ComEC/Rec2  21.96 
 
 
773 aa  67.8  0.0000000009  Bacillus cereus B4264  Bacteria  normal  0.0495736  n/a   
 
 
-
 
NC_013889  TK90_1202  DNA internalization-related competence protein ComEC/Rec2  26.94 
 
 
776 aa  67.8  0.0000000009  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.177641 
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  25.26 
 
 
841 aa  67.4  0.000000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4176  DNA internalization-related competence protein ComEC/Rec2  23.41 
 
 
773 aa  67.4  0.000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  30.04 
 
 
774 aa  67.4  0.000000001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  25.49 
 
 
765 aa  66.6  0.000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_010498  EcSMS35_2207  hypothetical protein  29.63 
 
 
754 aa  65.9  0.000000003  Escherichia coli SMS-3-5  Bacteria  normal  0.01066  normal  0.239269 
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  27.44 
 
 
773 aa  66.2  0.000000003  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  27.44 
 
 
773 aa  64.7  0.000000007  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  30.6 
 
 
737 aa  65.1  0.000000007  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_013061  Phep_2538  ComEC/Rec2-related protein  23.28 
 
 
604 aa  64.7  0.000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4370  ComEC/Rec2-related protein  21.63 
 
 
757 aa  64.7  0.000000008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.754467  normal 
 
 
-
 
NC_002978  WD1160  ComEC/Rec2 family protein  25.63 
 
 
720 aa  64.7  0.000000009  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4682  ComEC/Rec2-related protein  25.87 
 
 
752 aa  64.7  0.000000009  Methylobacterium extorquens PA1  Bacteria  normal  0.115227  normal 
 
 
-
 
NC_011772  BCG9842_B0792  DNA internalization-related competence protein ComEC/Rec2  25.27 
 
 
773 aa  63.9  0.00000001  Bacillus cereus G9842  Bacteria  normal  0.92497  hitchhiker  0.0000000434572 
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  28.81 
 
 
795 aa  63.9  0.00000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1074  hypothetical protein  28.83 
 
 
754 aa  64.3  0.00000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.361238  normal 
 
 
-
 
NC_011757  Mchl_5147  ComEC/Rec2-related protein  25.67 
 
 
752 aa  64.3  0.00000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0358979 
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  29.54 
 
 
783 aa  63.9  0.00000002  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  28.81 
 
 
783 aa  63.2  0.00000002  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  29.54 
 
 
783 aa  63.5  0.00000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  29.45 
 
 
754 aa  63.2  0.00000003  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
CP001509  ECD_00917  conserved inner membrane protein  28.7 
 
 
754 aa  62.4  0.00000004  Escherichia coli BL21(DE3)  Bacteria  normal  0.578469  n/a   
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  28.7 
 
 
754 aa  62.4  0.00000004  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
NC_010468  EcolC_2683  hypothetical protein  28.7 
 
 
754 aa  62.4  0.00000004  Escherichia coli ATCC 8739  Bacteria  normal  0.692344  normal  0.226957 
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  26.49 
 
 
763 aa  62.4  0.00000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_012892  B21_00924  hypothetical protein  28.7 
 
 
754 aa  62.4  0.00000004  Escherichia coli BL21  Bacteria  normal  0.630751  n/a   
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  29.78 
 
 
762 aa  62.4  0.00000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  27.22 
 
 
856 aa  62.4  0.00000005  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_008789  Hhal_1249  ComEC/Rec2-related protein  26.88 
 
 
710 aa  62  0.00000005  Halorhodospira halophila SL1  Bacteria  normal  0.435974  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  27.22 
 
 
856 aa  62.4  0.00000005  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  27.22 
 
 
856 aa  62.4  0.00000005  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  27.22 
 
 
842 aa  62  0.00000006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  27.61 
 
 
829 aa  61.6  0.00000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  27.01 
 
 
929 aa  62  0.00000006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  27.55 
 
 
773 aa  62  0.00000006  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_007798  NSE_0317  ComEC/Rec2 family protein  23.94 
 
 
736 aa  61.6  0.00000007  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0831  ComEC/Rec2-related protein  25.78 
 
 
719 aa  61.6  0.00000007  Sphingopyxis alaskensis RB2256  Bacteria  normal  hitchhiker  0.00619984 
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  25.93 
 
 
767 aa  61.6  0.00000007  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  24.86 
 
 
845 aa  61.2  0.00000008  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  27.4 
 
 
763 aa  61.2  0.00000009  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  28.57 
 
 
769 aa  60.5  0.0000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_4317  ComEC/Rec2-related protein  26.52 
 
 
872 aa  60.8  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1759  DNA internalization-related competence protein ComEC/Rec2  24.24 
 
 
814 aa  61.2  0.0000001  Geobacter lovleyi SZ  Bacteria  normal  0.0611654  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>