Gene NSE_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0317 
Symbol 
ID3931546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp260324 
End bp262534 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content38% 
IMG OID637900473 
ProductComEC/Rec2 family protein 
Protein accessionYP_506207 
Protein GI88608712 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTACAA AGAATCAAAC AAAGCTCTTT GTATGGATCC CCTTCCTGTT AAGTATCGGG 
ATTATACTTT TCTTTGAAGC TACTTTTTAC CCAAGACCGC ATCATTTGGT ACTCACAATA
TTTGGGCTAG GGCTACAGTT ATTCTTAGCT TATATAGCTA AAAAAGCCAG AACCGTAACA
CTGATATGTG TCATAATTTC CGCGGGATTT ATTATCGCAG AAATTCGAAC GCTGGTTTCC
TATACAGAAA TGATCAAAAC GCCCCAATAC ATTCAAAACG CAACAGGCAT GGTGCAAAGT
CTTTCACACA AAAAATCTGG AATGCTAATC ACGGTGAAGC ACGCTGGAAG TTCTTTAAAA
CTCCATTCGA CAAAAAGTCT AACAGATCTA CACTCGGGCG ATATAGTAAA CTTTTCCGCG
TACCTATTAC CAGTACAAGG TGCGGCAACA CCATCAGGCT ATGACTTTGC CATGTTTCAA
TATTTTAGCG GTGTAAGGGC TACAGGAAGA CTAGTCGGAG AAATCACGGT AGTAAAACCA
ACAAGTCACC AATCTATTTT TCCACGTATC AGAAAAGTCA TTCATGAAAA ATTCAAATAC
AACTTGGCGG AAATACCTTC TGAAATAGCT CTAGCACTCA CAATAGGTAA AAGAGATGGA
ATAGATCCAA AAATAAATGA GTTATTTAGA AAATCAGGAA CATCTCATTT GTTAGCAATT
TCTGGATTAC ATATGGGATT AGTAGGATTA TTTTTCTTTT CCCTTCTGAG AAGATCTTGT
ACGTTTTCTA CACACCTAAC ACTCAGGTAC GACATCAAAA AGCTTTCTGT TATCGCTGGA
ATAGCATCGA GTATTTTTTA TTTACAACTC TCTGGAATGC AGACATCTGC TCAGAGAGCT
TGCATAATGA TATGTACTTT TTTCCTTTCA ATACTGCTGG ATAAAAAACC AGATACATTA
CGTTCTATCA TCTTTGCAGC GACCGTTTTA ATCGTTTTAT ATCCCGAGAA CATATTCAAA
CCGGGCTTTC AAATGTCATT CTTTGCTGTA CTTGGAATAT GCTCATGTAA CAGAAGGTCA
TCCCCGTACA TACATACAGA ATTTGCTCCT CTCTTTAAAA TAGGAAAGTC AAAATTCGAC
ATTAAGGAGT TAACAGCAGT AATACAACCT GAAATGACAC TGATCCCACA ATCAAAACAT
CAGACCAAAC CTAGCAACAA TACTACGCGA CGATCTTTTC TCTCTTTACA CAAATTCTCC
ACCGATTCAG TTCACAAAGG CAAAATAAAA TCGTTCTGTA AGAGCATACT TAAACCGTTC
ACATGCCTAT TGGGGATAAT AAAAACCTCG ATTTTTGCGA CTGCTGCCAC TGCCCCTTTC
ATTTCATATC ACTTTCACTA TCTTTCTGTG ATTGGAGTGG CTGCAAACGC TATAGCAATA
CCGTTCACAT CTTTCTTAGT CATACCGACA CTTGCCGGAA TACTGCTCCT CATGCCTTTA
TATGATTCCG AGCTTTTATA TGCCCTCCTT TCAACTGAAA TAAAAATATT ACTAAGCCTC
ATGGAATCGT TTAGCCACTT AAACCTAGGC TACTTCAACG TGCAGGGCTT TTCCGGAACA
ACGTTGCTTG TAATGGTCAC CGGAACCTTA TCGCTTCTTA TAGGTACAAC ATGGAAGCGA
TACCTGGGTA TAATGCCCAT TGCGATGGGA ATTGCGATGA TAAAATTCTC GCCACTACCA
GATATCTTCA TCTCAGAGAA GAATATCGCG ATACGATCAC AAGACAACAA CCTATACTTT
CTTAATGCGT CAAGAGTTCC ACAAAATTTC ATCGCAAAGA AATGGCTGCA GTATTCAGGA
TGCAAGGCAA GCAAAATATC TAACATACCT AATAGCGAAA TAGAAAAACG GGAAAACTCG
TACGTGTGTA CAAAAAATGG CAAAACAATC ACCATCACTT TTACAAAGGA CGCAAAAAAC
AGAACACATA ACAACTTTTC TGTGCACATG AATGGACCAA TAGTAGATAA CAAAAGAACA
TGTTCCTCAC TAGAAATAGT AGAAAATCAA AATACGTTTA TCTCTATGCA GAACAATGGA
ATAAAAACGA CAAGGGGAAG AAATTGGCCA CAAGAGATTC TCGCATCGAA ACCACATTAC
AGCGATCAGT ACAGTAGATG TCCAATAAAC CCTGTACAGA GCTATAATTA G
 
Protein sequence
MSTKNQTKLF VWIPFLLSIG IILFFEATFY PRPHHLVLTI FGLGLQLFLA YIAKKARTVT 
LICVIISAGF IIAEIRTLVS YTEMIKTPQY IQNATGMVQS LSHKKSGMLI TVKHAGSSLK
LHSTKSLTDL HSGDIVNFSA YLLPVQGAAT PSGYDFAMFQ YFSGVRATGR LVGEITVVKP
TSHQSIFPRI RKVIHEKFKY NLAEIPSEIA LALTIGKRDG IDPKINELFR KSGTSHLLAI
SGLHMGLVGL FFFSLLRRSC TFSTHLTLRY DIKKLSVIAG IASSIFYLQL SGMQTSAQRA
CIMICTFFLS ILLDKKPDTL RSIIFAATVL IVLYPENIFK PGFQMSFFAV LGICSCNRRS
SPYIHTEFAP LFKIGKSKFD IKELTAVIQP EMTLIPQSKH QTKPSNNTTR RSFLSLHKFS
TDSVHKGKIK SFCKSILKPF TCLLGIIKTS IFATAATAPF ISYHFHYLSV IGVAANAIAI
PFTSFLVIPT LAGILLLMPL YDSELLYALL STEIKILLSL MESFSHLNLG YFNVQGFSGT
TLLVMVTGTL SLLIGTTWKR YLGIMPIAMG IAMIKFSPLP DIFISEKNIA IRSQDNNLYF
LNASRVPQNF IAKKWLQYSG CKASKISNIP NSEIEKRENS YVCTKNGKTI TITFTKDAKN
RTHNNFSVHM NGPIVDNKRT CSSLEIVENQ NTFISMQNNG IKTTRGRNWP QEILASKPHY
SDQYSRCPIN PVQSYN