Gene Coch_2101 details

Gene Information

• Locus tag: Coch_2101
• ID: 8368562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2516902
• End bp: 2518812
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 644984555
• Product: ComEC/Rec2-related protein
• Protein accession: YP_003142206
• Protein GI: 256820927
• COG category: [R] General function prediction only
• COG ID: [COG0658] Predicted membrane metal-binding protein
• TIGRFAM ID: [TIGR00360] ComEC/Rec2-related protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.639499
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGATTTG TAAATACTCC CATATTAACT ATCTTATTAG GACTCATAGG AGGGATTGCT 
ATTACTGATG TAATAGCTCC CTCTTTTTTA TTTGCAATAA GTAGTTGTAT ATGCTTACTG 
CTCACTTTGG CAATACATCA GTTTTTAGCT ACCAAACGAT ATGCTCTTCG TCACGGAATT 
GTAATACACG TAGGCCTCAC TTCTGTAGCA GTGGGTATAC TGATAACTAT CCTTCATACC 
CCCACCTATA ACCCTAAGCA TTACACACAA AAACTAAATG CCAATGAATA TTACACTTTA 
GAAGCTGACA TAATAGAGCA AACTTCACAA ACAGATTACG GTACTACCTT TAAAGCCGAG 
CTCTTAACGG CTAACCATAC AAGTATAGAA GGAAAAATTC TGTGCTTTTT TCCTTCTAAA 
ACAATTACCG ATGATGTGAA AACATTAGCT CCAACAGATA GATTGGTTTT TGTAGGCAAA 
TATACTCCTA TATCTCCTCC TAAAAATCCA TATCAATTCA ACTATAAACG GTATATGGAG 
CGAAAAGGTG TATATGGGCG AACAGAAGTA GTTGCTTTTT CTGTTGTTAA AAATAATACA 
ACAGGTTTTA TGGGGAGTAT TGCGAGAACA CACTCTCATT TAGCTATTGT AATAGACAAA 
CATTTTAATC AAGAGTCTTC TGCTCTGTTA AAAACACTAC TCTTAGGAAA ACGCACTGAT 
TTAGATAACG AAGTCTATCA ACATTATGTT GATGCGGGAG CGGTGCATAT CTTAGCTATT 
TCGGGATTAC ACGTAGGGAT TATTACTGCT ATACTCCTTT TATTACTGCA AAAGATGCCT 
AATTTAGGTT TTTATCGTCC ACTGCGATAC TTTATACTAT TAGCAGGCTT ATGGGCTTTT 
GCTTTCATAG CAGGCACCTC TCCTTCGGTA TTGAGGGCTA CTGTAATGTT CAGCTTTGTA 
GGATTGAGCA CTCTTATACG TAGGAAACAA GGCAGGTTTG ATGCGTTAAT GCTCTCAATG 
TTATTTCTGT TGCTTATCAA TCCTTACTAT TTGTATGATG TAGGCTTTCA GCTGAGTTAT 
GCAGCGGTAT TTTCTATAAT GAAATTCTAC CCTGTGATGC GCAAATGGTG GCAACCTGAG 
AATAAATACT TACAATGGAT ATGGTCACTT TTTTTGGTAG GATTATCCGC TCAAATAGTA 
GTTTTACCTA TCAGTTTATA CTATTTTCAC CAATTTCCCA TATTGTTTTT CGTTTCTAAC 
TTGGTTGTAG TACCTTTATT ACAACCTATA CTCATAGGAG GTATTATTTC TTTATGTTTG 
GGAAGTTTGG GAATTTTACC TTACGCAATA GTCTTTATCT TAGAAAAATT AATCGCTTTG 
ATGAACTTTT TGGTGGCATT TATAGCTCAT CAAGAAATGT TTATCATACG CAACATACCT 
TTTACTACTC CCCTACTTCT TTCTTCCTTA TTGATGGTGT TCATACTCAT TATTTTTGTA 
CATTTTAGGA AATACAAAGT ATTGGTAGCA CTTCTCTTAT CTGTTATTTT ATTTCAAGGG 
GTACTTTTCT ATCACAAATA TAAATTAGAA ACAACTGAAG AAATGCTAGT TTTCAGCAAA 
TATAAACAGA AAGTAATCAC CATTAGACAA GGTGATAAAC TAAGTATCTA TCAAACAGAT 
ACAATTTCTC CTGACCCTGT AGTAATGAAC TATATAAAAA ATAAAGGTAT CAGCAATATC 
GAGCTTAAGA AGATACCTTA TATATTGCAT TTCAAACAAA AAAACTACTT GCTAATGGAT 
AGTTTAGGGG TATACCCAAA ATCCAAGCAA GTAGTTATTG ATAGTGTTAT TTTCTTACAA 
AAACCTAAAA TCAATTTGGA TAGAATGAAG CAAGATTTAT CGCTTAGGTA G 

 

Protein sequence

MRFVNTPILT ILLGLIGGIA ITDVIAPSFL FAISSCICLL LTLAIHQFLA TKRYALRHGI 
VIHVGLTSVA VGILITILHT PTYNPKHYTQ KLNANEYYTL EADIIEQTSQ TDYGTTFKAE 
LLTANHTSIE GKILCFFPSK TITDDVKTLA PTDRLVFVGK YTPISPPKNP YQFNYKRYME 
RKGVYGRTEV VAFSVVKNNT TGFMGSIART HSHLAIVIDK HFNQESSALL KTLLLGKRTD 
LDNEVYQHYV DAGAVHILAI SGLHVGIITA ILLLLLQKMP NLGFYRPLRY FILLAGLWAF 
AFIAGTSPSV LRATVMFSFV GLSTLIRRKQ GRFDALMLSM LFLLLINPYY LYDVGFQLSY 
AAVFSIMKFY PVMRKWWQPE NKYLQWIWSL FLVGLSAQIV VLPISLYYFH QFPILFFVSN 
LVVVPLLQPI LIGGIISLCL GSLGILPYAI VFILEKLIAL MNFLVAFIAH QEMFIIRNIP 
FTTPLLLSSL LMVFILIIFV HFRKYKVLVA LLLSVILFQG VLFYHKYKLE TTEEMLVFSK 
YKQKVITIRQ GDKLSIYQTD TISPDPVVMN YIKNKGISNI ELKKIPYILH FKQKNYLLMD 
SLGVYPKSKQ VVIDSVIFLQ KPKINLDRMK QDLSLR