| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1074 |
|---|
| Symbol | |
|---|
| ID | 6967476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1097318 |
|---|
| End bp | 1099582 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643385086 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002269585 |
|---|
| Protein GI | 209400423 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.361238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CGACAGTCGG CGTATGCATA ATTTGCGGAA TTTTTCCGTT GCTGATTTTG
CCCCAATTGC CTGGGACATT AACCCTTGCG TTTCTGACTC TCTTCGCCTG CGTACTGGCA
TTTATCCCTG TTAAAACCGT CCGTTATATC GCGCTGACGT TGCTGTTTTT CGTTTGGGGC
ATATTATCAG CAAAGCAAAT TTTGTTGGCA GGAGAAACCT TAACTGGCGC GACGCAGGAT
GCAATTGTTG AGATCACTGC TACTGACGGC ATGACCACTC ATTACGGTCA AATTACTTAT
CTACAAGGTC AACGTATATT CCCTGCGCCA GGCCTTGTGC TGTATGGCGA ATATCTTCCG
CAAGCGGTTT GTGCCGGACA ACTGTGGTCA ATGAAACTCA AAGTTCGTGC CGTTCATGGT
CAACTTAATG ATGGCGGCTT TGATAGCCAG CGTTATGCCA TTGCCCAGCA TCAGCCGCTC
ACCGGCCGCT TTCTGCAGGC AAGTGTTATT GAACCGAATT GTAGCCTGCG TGCACAGTAT
CTGGCGTCAC TACAAACAAC GCTGCAACCC TATCCGTGGA ATGCGGTTAT TCTTGGTTTA
GGTATGGGGG AACGGTTATC CGTCCCTAAA GAAATCAAAA ATATCATGCG TGATACTGGA
ACGGCGCATT TAATGGCGAT ATCGGGATTG CACATCGCTT TTGCGGCGTT GCTGGCTGCC
GGACTCATTC GCAGTGGACA AATTTTTCTG CCTGGGCGCT GGATCCACTG GCAAATGCCA
TTAATTGGCG GAATCTGCTG TGCTGCTTTT TATGCCTGGC TGACGGGAAT GCAACCTCCT
GCATTGCGTA CCGTTGTGGC GCTTGCTACG TGGGGTATGC TTAAGTTAAG TGGGCGACAG
TGGAGTGGCT GGGATGTATG GATATGTTGT CTGGCGGCAA TTTTGCTGAT GGATCCTGTT
GTCATTCTCT CGCAAAGTTT ATGGCTCTCT GCCGCTGCGG TCGCGGCATT GATATTTTGG
TATCAGTGGT TTCCCTGTCC TGAGTGGCAA CTGCCGCCGG TATTGCGTGC AGTTGTTTCC
CTCATCCATC TGCAACTGGG AATCACACTT CTGCTTATGC CCGTGCAAAT CGTCATTTTT
CATGGCATTA GTCTGACCTC GTTTATTGCA AATCTATTAG CAATTCCCTT GGTGACATTT
ATCACGGTTC CGTTGATCCT CGCCGCGATG GTTGTGCATT TAAGCGGGCC GTTAATCCTG
GATCAAGGGT TATGGTTTCT TGCCGACCGG TCTTTGGCTT TACTTTTCTT GGGGTTAAAG
AGTTTGCCAG AAGGGTGGAT CAACATTGCT GAACGTTGGC AATGGCTATC ATTTTCCCCA
TGGTTCTTAC TGGTGGTATG GCGATTAAAC GCCTGGCGAA CGTTGCCAGC AATGTGTGTG
GCTGTAGGCT TGCTGATGTG CTGGCCGCTG TGGCAAAAAC CTCGACCTGA CGAGTGGCAA
GTGTACATGC TTGATGTCGG GCAAGGGCTG GCAATGGTGA TAGCCAGAAA CGGCAAAGCG
ATTCTCTATG ACACGGGACT GGCCTGGCCT GAAGGGGATA GTGGGCAACA ACTGATTATC
CCCTGGCTCC ACTGGCATAA TCTTGAACCG GAAGGCGTTA TCCTGAGTCA TGAACATCTG
GATCACCGGG GAGGGCTGGA CTCAATATTG CATACATGGC CGATGTTATG GATCAGAAGT
CCGTTAAACT GGGAACATCA TCAGCCCTGT GTGCGTGGCG AAGCGTGGCA ATGGCAAGGA
TTGCGTTTCA GCGCGCACTG GCCTTTACAA GGTCGCAACG ATAAAGGAAA TAACCATTCC
TGTGTGGTTA AGGTTGATGA CGGGACGAAT AGCATTCTTC TAACCGGTGA TATTGAAGCC
CCAGCTGAAC AAAAGATGCT AAGCCGTTAC TGGCAGCAAG TGCAGGCAAC ATTGCTTCAG
GTACCTCACC ATGGCAGTAA TACCTCATCA TCATTGCCAT TAATTCAGCG AGTGAATGGA
AAAGTGGCAC TCGCATCGGC ATCGCGCTAT AACGCATGGC GACTGCCCTC TAACAAAGTT
AAGCATCGCT ATCAACAACA AGGTTATACG TGGCTTGATA CTCCTCATCA GGGGCAAGTA
ACGGTCGATT TTTCAGCGCA AGGCTGGCGG ATTAGCAGCC TCAGGGAGCA AATTTTACCT
CGTTGGTATC ATCAGTGGTT TGGCGTGCCA GTGGATAACG GGTAG
|
|---|
| Protein sequence | MKITTVGVCI ICGIFPLLIL PQLPGTLTLA FLTLFACVLA FIPVKTVRYI ALTLLFFVWG
ILSAKQILLA GETLTGATQD AIVEITATDG MTTHYGQITY LQGQRIFPAP GLVLYGEYLP
QAVCAGQLWS MKLKVRAVHG QLNDGGFDSQ RYAIAQHQPL TGRFLQASVI EPNCSLRAQY
LASLQTTLQP YPWNAVILGL GMGERLSVPK EIKNIMRDTG TAHLMAISGL HIAFAALLAA
GLIRSGQIFL PGRWIHWQMP LIGGICCAAF YAWLTGMQPP ALRTVVALAT WGMLKLSGRQ
WSGWDVWICC LAAILLMDPV VILSQSLWLS AAAVAALIFW YQWFPCPEWQ LPPVLRAVVS
LIHLQLGITL LLMPVQIVIF HGISLTSFIA NLLAIPLVTF ITVPLILAAM VVHLSGPLIL
DQGLWFLADR SLALLFLGLK SLPEGWINIA ERWQWLSFSP WFLLVVWRLN AWRTLPAMCV
AVGLLMCWPL WQKPRPDEWQ VYMLDVGQGL AMVIARNGKA ILYDTGLAWP EGDSGQQLII
PWLHWHNLEP EGVILSHEHL DHRGGLDSIL HTWPMLWIRS PLNWEHHQPC VRGEAWQWQG
LRFSAHWPLQ GRNDKGNNHS CVVKVDDGTN SILLTGDIEA PAEQKMLSRY WQQVQATLLQ
VPHHGSNTSS SLPLIQRVNG KVALASASRY NAWRLPSNKV KHRYQQQGYT WLDTPHQGQV
TVDFSAQGWR ISSLREQILP RWYHQWFGVP VDNG
|
|---|
| |