More than 300 homologs were found in PanDaTox collection
for query gene Krad_2537 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_2537  two component transcriptional regulator, LuxR family  100 
 
 
242 aa  461  1e-129  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.34 
 
 
216 aa  201  9e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  46.03 
 
 
225 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  48.05 
 
 
217 aa  191  9e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  47.84 
 
 
225 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2658  two component transcriptional regulator, LuxR family  46.72 
 
 
215 aa  186  4e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  47.19 
 
 
232 aa  185  5e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  47.64 
 
 
226 aa  182  4.0000000000000006e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  45.49 
 
 
220 aa  182  5.0000000000000004e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  43.7 
 
 
223 aa  179  2.9999999999999997e-44  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  44.64 
 
 
226 aa  178  5.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  44.21 
 
 
224 aa  178  5.999999999999999e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  45.06 
 
 
221 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  45.92 
 
 
222 aa  177  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  43.51 
 
 
222 aa  177  2e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  45.06 
 
 
221 aa  176  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  43.83 
 
 
219 aa  176  3e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  44.64 
 
 
221 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  44.64 
 
 
228 aa  176  4e-43  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  44.26 
 
 
224 aa  175  6e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  44.87 
 
 
236 aa  174  9e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  43.04 
 
 
220 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  42.8 
 
 
230 aa  174  9.999999999999999e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  44.54 
 
 
225 aa  174  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.67 
 
 
261 aa  172  5e-42  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  44.35 
 
 
223 aa  171  1e-41  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  45.02 
 
 
226 aa  170  2e-41  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  43.75 
 
 
225 aa  169  3e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  42.92 
 
 
233 aa  169  4e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  44.07 
 
 
226 aa  168  6e-41  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  45.26 
 
 
225 aa  168  7e-41  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  44.21 
 
 
222 aa  168  8e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  42.55 
 
 
224 aa  167  9e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  42.44 
 
 
224 aa  167  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  41.7 
 
 
226 aa  166  2.9999999999999998e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  43.64 
 
 
217 aa  166  4e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  42.92 
 
 
221 aa  165  5e-40  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  44.3 
 
 
228 aa  165  5e-40  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.21 
 
 
222 aa  164  9e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  43.21 
 
 
226 aa  164  1.0000000000000001e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  41.63 
 
 
218 aa  163  2.0000000000000002e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  43.35 
 
 
221 aa  163  2.0000000000000002e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  44.02 
 
 
226 aa  162  4.0000000000000004e-39  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  43.72 
 
 
221 aa  162  4.0000000000000004e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  45.06 
 
 
244 aa  162  5.0000000000000005e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  43.35 
 
 
224 aa  162  5.0000000000000005e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  40.73 
 
 
250 aa  161  9e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  44.87 
 
 
227 aa  161  1e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  42.8 
 
 
241 aa  160  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  41.49 
 
 
222 aa  159  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  42.74 
 
 
231 aa  159  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.7 
 
 
222 aa  159  3e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  43.62 
 
 
227 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  40.08 
 
 
215 aa  159  5e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  42.67 
 
 
227 aa  159  5e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  42.49 
 
 
225 aa  158  7e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  41.99 
 
 
225 aa  158  7e-38  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  41.6 
 
 
218 aa  157  1e-37  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  43.48 
 
 
216 aa  157  1e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  40.52 
 
 
221 aa  157  1e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  44.4 
 
 
226 aa  156  2e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  44.64 
 
 
229 aa  157  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  42.86 
 
 
230 aa  156  2e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  41.38 
 
 
214 aa  157  2e-37  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  41.2 
 
 
220 aa  157  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.02 
 
 
221 aa  156  3e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.29 
 
 
247 aa  156  3e-37  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  43.35 
 
 
214 aa  156  3e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.19 
 
 
258 aa  155  4e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  42.49 
 
 
222 aa  155  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  44.3 
 
 
227 aa  155  5.0000000000000005e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  40.8 
 
 
234 aa  155  5.0000000000000005e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  43.28 
 
 
225 aa  155  5.0000000000000005e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  41.7 
 
 
235 aa  154  1e-36  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  46.05 
 
 
241 aa  154  1e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_014158  Tpau_0647  two component transcriptional regulator, LuxR family  41.3 
 
 
212 aa  154  1e-36  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.518884  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  40.91 
 
 
228 aa  154  1e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  39.34 
 
 
231 aa  154  1e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  37.92 
 
 
233 aa  154  1e-36  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.53 
 
 
244 aa  154  2e-36  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  32.94 
 
 
261 aa  154  2e-36  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  36.48 
 
 
248 aa  153  2e-36  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  43.33 
 
 
239 aa  154  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  40.85 
 
 
230 aa  153  2e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  42.29 
 
 
213 aa  154  2e-36  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  44.02 
 
 
224 aa  153  2e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.83 
 
 
225 aa  153  2.9999999999999998e-36  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.38 
 
 
255 aa  153  2.9999999999999998e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  40.17 
 
 
225 aa  153  2.9999999999999998e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  41.63 
 
 
219 aa  153  2.9999999999999998e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  42.24 
 
 
215 aa  152  4e-36  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  38.56 
 
 
223 aa  152  4e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  44.07 
 
 
225 aa  152  4e-36  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  41.99 
 
 
215 aa  152  4e-36  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.42 
 
 
226 aa  152  4e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  40.08 
 
 
258 aa  152  5e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  40.51 
 
 
234 aa  152  5e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  42.06 
 
 
224 aa  152  5.9999999999999996e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  41.74 
 
 
214 aa  151  7e-36  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  43.83 
 
 
217 aa  151  8.999999999999999e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
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