More than 300 homologs were found in PanDaTox collection
for query gene Krad_2658 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_2658  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  426  1e-118  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  54.84 
 
 
225 aa  209  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  48.62 
 
 
226 aa  190  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.53 
 
 
216 aa  189  2.9999999999999997e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  49.52 
 
 
226 aa  187  8e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.42 
 
 
223 aa  187  9e-47  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_009664  Krad_2537  two component transcriptional regulator, LuxR family  46.72 
 
 
242 aa  186  3e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.48 
 
 
222 aa  185  4e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  48.62 
 
 
223 aa  182  3e-45  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  46.79 
 
 
224 aa  177  9e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.3 
 
 
224 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47.22 
 
 
221 aa  176  3e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  46.01 
 
 
222 aa  175  5e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  44.64 
 
 
242 aa  174  7e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  46.48 
 
 
224 aa  174  8e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  44.91 
 
 
221 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  45.33 
 
 
236 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  46.01 
 
 
217 aa  172  2.9999999999999996e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  47.42 
 
 
214 aa  172  2.9999999999999996e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  45.41 
 
 
232 aa  172  2.9999999999999996e-42  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  46.3 
 
 
220 aa  172  3.9999999999999995e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  45.54 
 
 
225 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  45.58 
 
 
217 aa  169  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  46.05 
 
 
225 aa  169  4e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  45.07 
 
 
228 aa  168  5e-41  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  44.6 
 
 
221 aa  168  7e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.21 
 
 
226 aa  168  7e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  44.19 
 
 
230 aa  167  1e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  46.01 
 
 
226 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.5 
 
 
236 aa  166  4e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  43.46 
 
 
222 aa  164  9e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.86 
 
 
225 aa  164  1.0000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  43.72 
 
 
231 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  45.33 
 
 
213 aa  164  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  44.39 
 
 
233 aa  162  3e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  43.58 
 
 
234 aa  162  3e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  43.36 
 
 
239 aa  162  3e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.54 
 
 
218 aa  161  6e-39  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  42.27 
 
 
226 aa  161  6e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  43.98 
 
 
224 aa  161  7e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.72 
 
 
244 aa  161  8.000000000000001e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  42.72 
 
 
222 aa  161  8.000000000000001e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  42.99 
 
 
226 aa  160  1e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  45.07 
 
 
302 aa  160  1e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  44.75 
 
 
224 aa  160  1e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  43.52 
 
 
215 aa  160  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  42.4 
 
 
218 aa  160  2e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  42.06 
 
 
221 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  42.13 
 
 
220 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  43.12 
 
 
226 aa  158  5e-38  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  41.31 
 
 
225 aa  158  5e-38  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  40.93 
 
 
248 aa  158  5e-38  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  43.66 
 
 
217 aa  157  8e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  40.26 
 
 
249 aa  157  8e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  40.47 
 
 
228 aa  158  8e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  46.67 
 
 
213 aa  157  1e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  42.92 
 
 
219 aa  157  1e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  44.19 
 
 
225 aa  157  1e-37  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  42.73 
 
 
223 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  44.8 
 
 
229 aa  156  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  42.59 
 
 
226 aa  156  2e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  44.6 
 
 
219 aa  156  2e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  42.52 
 
 
226 aa  155  4e-37  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  41.31 
 
 
221 aa  155  4e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  44.24 
 
 
224 aa  155  5.0000000000000005e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  41.86 
 
 
224 aa  155  5.0000000000000005e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  43.66 
 
 
216 aa  155  6e-37  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  42.59 
 
 
241 aa  155  6e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  44.44 
 
 
225 aa  154  7e-37  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.38 
 
 
230 aa  154  8e-37  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  43.66 
 
 
247 aa  154  9e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  42.27 
 
 
241 aa  154  9e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  43.72 
 
 
216 aa  154  9e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  43.12 
 
 
230 aa  153  1e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  42.38 
 
 
217 aa  154  1e-36  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  42.25 
 
 
221 aa  153  2e-36  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  43.93 
 
 
217 aa  153  2e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  43.98 
 
 
227 aa  153  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  43.64 
 
 
226 aa  153  2e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  42.2 
 
 
239 aa  153  2e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4009  two component transcriptional regulator, LuxR family  40.83 
 
 
231 aa  153  2e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0669057  normal  0.324745 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  42.72 
 
 
216 aa  152  2.9999999999999998e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  41.31 
 
 
225 aa  152  2.9999999999999998e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  40.38 
 
 
235 aa  152  2.9999999999999998e-36  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  41.31 
 
 
234 aa  152  2.9999999999999998e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  42.25 
 
 
219 aa  152  5e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  40.38 
 
 
233 aa  152  5e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  41.98 
 
 
229 aa  152  5e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.38 
 
 
221 aa  151  5.9999999999999996e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  42.13 
 
 
220 aa  151  5.9999999999999996e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  42.06 
 
 
227 aa  151  7e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  42.99 
 
 
228 aa  151  7e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  39.74 
 
 
231 aa  151  8e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  43.66 
 
 
225 aa  151  8e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_008699  Noca_3488  response regulator receiver  43.32 
 
 
229 aa  151  8.999999999999999e-36  Nocardioides sp. JS614  Bacteria  normal  0.920048  n/a   
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  41.78 
 
 
232 aa  150  1e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  41.87 
 
 
219 aa  150  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.91 
 
 
261 aa  150  1e-35  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  41.4 
 
 
215 aa  149  2e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  40.83 
 
 
228 aa  149  2e-35  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
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