More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_91 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_91  DNA-binding response regulator, LuxR family  100 
 
 
243 aa  498  1e-140  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0295  two component LuxR family transcriptional regulator  97.53 
 
 
243 aa  483  1e-136  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0974  two component LuxR family transcriptional regulator  38.16 
 
 
247 aa  169  3e-41  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00000126323  n/a   
 
 
-
 
NC_002936  DET1144  DNA-binding response regulator  35.06 
 
 
247 aa  153  2.9999999999999998e-36  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1561  LuxR family DNA-binding response regulator  34.67 
 
 
226 aa  143  2e-33  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.0012725  n/a   
 
 
-
 
NC_013552  DhcVS_1373  DNA-binding response regulator, LuxR family  32.33 
 
 
238 aa  138  7e-32  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  34.39 
 
 
216 aa  134  1.9999999999999998e-30  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_013552  DhcVS_1318  DNA-binding response regulator, LuxR family  32.73 
 
 
222 aa  132  5e-30  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  31.84 
 
 
233 aa  130  3e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0277195 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.09 
 
 
239 aa  129  3e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.711047 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  33.48 
 
 
224 aa  127  1.0000000000000001e-28  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  27.31 
 
 
223 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  34.55 
 
 
208 aa  126  2.0000000000000002e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_002936  DET1531  LuxR family DNA-binding response regulator  30.84 
 
 
219 aa  126  3e-28  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000956559  n/a   
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  32.89 
 
 
231 aa  126  4.0000000000000003e-28  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  31.96 
 
 
213 aa  126  4.0000000000000003e-28  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  32.26 
 
 
216 aa  126  4.0000000000000003e-28  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  30.32 
 
 
221 aa  125  5e-28  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  32.26 
 
 
244 aa  125  5e-28  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  32.73 
 
 
225 aa  125  5e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.665179 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  32.27 
 
 
231 aa  125  7e-28  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  31.82 
 
 
211 aa  125  7e-28  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  30.45 
 
 
209 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  33.93 
 
 
222 aa  124  1e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  32.27 
 
 
217 aa  124  1e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  32.08 
 
 
213 aa  124  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal 
 
 
-
 
NC_013441  Gbro_2140  response regulator receiver  30.04 
 
 
218 aa  123  2e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.95288  n/a   
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  32.27 
 
 
212 aa  123  3e-27  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  31.34 
 
 
217 aa  122  4e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  33.33 
 
 
224 aa  122  5e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  29.86 
 
 
216 aa  122  6e-27  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  31.82 
 
 
212 aa  122  6e-27  Salinispora tropica CNB-440  Bacteria  normal  normal  0.967001 
 
 
-
 
NC_013093  Amir_1910  two component transcriptional regulator, LuxR family  31.96 
 
 
218 aa  122  7e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  33.94 
 
 
219 aa  122  7e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  31.67 
 
 
212 aa  121  8e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  29.55 
 
 
216 aa  121  9.999999999999999e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  29.78 
 
 
216 aa  121  9.999999999999999e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  33.33 
 
 
222 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4126  two component LuxR family transcriptional regulator  31.22 
 
 
220 aa  120  1.9999999999999998e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  31.65 
 
 
219 aa  120  1.9999999999999998e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4201  two component LuxR family transcriptional regulator  31.22 
 
 
215 aa  120  1.9999999999999998e-26  Mycobacterium sp. KMS  Bacteria  normal  0.180608  normal 
 
 
-
 
NC_009077  Mjls_4357  two component LuxR family transcriptional regulator  31.22 
 
 
215 aa  120  1.9999999999999998e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.171113 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  28.11 
 
 
219 aa  120  1.9999999999999998e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  33.18 
 
 
209 aa  120  1.9999999999999998e-26  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  31.05 
 
 
217 aa  120  3e-26  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  31.65 
 
 
215 aa  119  3e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  31.22 
 
 
216 aa  119  3e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  33.8 
 
 
230 aa  119  3.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  30.96 
 
 
241 aa  119  4.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  31.31 
 
 
226 aa  119  4.9999999999999996e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  31.96 
 
 
218 aa  118  9e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  35 
 
 
220 aa  117  9.999999999999999e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  28.05 
 
 
219 aa  117  9.999999999999999e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  32.13 
 
 
219 aa  117  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  30.32 
 
 
224 aa  117  1.9999999999999998e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  28.96 
 
 
229 aa  116  3e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0092  LuxR family DNA-binding response regulator  31.22 
 
 
236 aa  115  3.9999999999999997e-25  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  30.04 
 
 
227 aa  116  3.9999999999999997e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  32.72 
 
 
214 aa  116  3.9999999999999997e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_008146  Mmcs_1076  two component LuxR family transcriptional regulator  32.59 
 
 
228 aa  115  3.9999999999999997e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1092  two component LuxR family transcriptional regulator  32.59 
 
 
228 aa  115  3.9999999999999997e-25  Mycobacterium sp. KMS  Bacteria  normal  0.123414  normal  0.110897 
 
 
-
 
NC_009077  Mjls_1103  two component LuxR family transcriptional regulator  32.59 
 
 
228 aa  115  3.9999999999999997e-25  Mycobacterium sp. JLS  Bacteria  normal  0.191898  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  32.43 
 
 
222 aa  115  5e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  34.7 
 
 
222 aa  115  6.9999999999999995e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  29.91 
 
 
222 aa  115  7.999999999999999e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.42 
 
 
216 aa  114  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  32.38 
 
 
213 aa  114  1.0000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  29.91 
 
 
228 aa  114  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  30.59 
 
 
233 aa  114  1.0000000000000001e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  30.88 
 
 
218 aa  114  1.0000000000000001e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  31.8 
 
 
207 aa  114  1.0000000000000001e-24  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  31.8 
 
 
207 aa  114  1.0000000000000001e-24  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  30.99 
 
 
214 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  31.34 
 
 
217 aa  114  1.0000000000000001e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_013093  Amir_1617  two component transcriptional regulator, LuxR family  30.73 
 
 
214 aa  114  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.321528  n/a   
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  29.28 
 
 
242 aa  114  2.0000000000000002e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  31.34 
 
 
213 aa  114  2.0000000000000002e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  28.32 
 
 
213 aa  113  3e-24  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  28.44 
 
 
220 aa  113  3e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  30.41 
 
 
224 aa  113  3e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  30.7 
 
 
212 aa  113  3e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  30.18 
 
 
221 aa  113  3e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  31.34 
 
 
228 aa  113  3e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  33.94 
 
 
219 aa  112  4.0000000000000004e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_007005  Psyr_1940  LuxR response regulator receiver  28.84 
 
 
222 aa  112  4.0000000000000004e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.95717  normal 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.14 
 
 
222 aa  112  4.0000000000000004e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  31.67 
 
 
225 aa  112  4.0000000000000004e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  30.33 
 
 
210 aa  112  4.0000000000000004e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  30.88 
 
 
224 aa  112  5e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2130  DNA-binding response regulator, LuxR family  29.3 
 
 
222 aa  112  6e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  30.88 
 
 
215 aa  112  6e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  30.04 
 
 
215 aa  112  7.000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  28.89 
 
 
214 aa  111  8.000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  29.78 
 
 
216 aa  111  8.000000000000001e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.77 
 
 
221 aa  111  9e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  29.17 
 
 
222 aa  111  9e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  28.57 
 
 
229 aa  111  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  30.18 
 
 
226 aa  111  1.0000000000000001e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  28.96 
 
 
236 aa  111  1.0000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  31.34 
 
 
215 aa  111  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
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