More than 300 homologs were found in PanDaTox collection
for query gene Bcav_3647 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  100 
 
 
255 aa  494  1e-139  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  71.72 
 
 
269 aa  328  4e-89  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  70.68 
 
 
249 aa  328  6e-89  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  68.77 
 
 
259 aa  307  1.0000000000000001e-82  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  60.24 
 
 
269 aa  291  1e-77  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  56.56 
 
 
282 aa  265  4e-70  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  52.67 
 
 
253 aa  240  2e-62  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  56.25 
 
 
296 aa  231  1e-59  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  53.41 
 
 
250 aa  223  2e-57  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  55.56 
 
 
276 aa  222  4.9999999999999996e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  51.67 
 
 
263 aa  217  2e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  49.59 
 
 
254 aa  216  4e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  51.97 
 
 
258 aa  210  2e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  52.12 
 
 
258 aa  209  2e-53  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  48.59 
 
 
252 aa  204  1e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  50.2 
 
 
287 aa  204  2e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  52.42 
 
 
253 aa  202  3e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  46.34 
 
 
249 aa  202  3e-51  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  49.4 
 
 
259 aa  202  4e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  50.62 
 
 
258 aa  192  4e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  50.83 
 
 
258 aa  192  4e-48  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  50.41 
 
 
258 aa  192  5e-48  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  50.41 
 
 
258 aa  192  5e-48  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  49.4 
 
 
250 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  49.59 
 
 
259 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  44.98 
 
 
251 aa  186  3e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  46.72 
 
 
269 aa  183  2.0000000000000003e-45  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  46.31 
 
 
269 aa  183  3e-45  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  43.36 
 
 
258 aa  177  1e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  48.56 
 
 
258 aa  177  2e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  48.47 
 
 
258 aa  171  1e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  44.44 
 
 
266 aa  169  6e-41  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  41.25 
 
 
265 aa  165  5.9999999999999996e-40  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  45.58 
 
 
264 aa  162  6e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  43.17 
 
 
257 aa  161  9e-39  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  39.53 
 
 
270 aa  161  1e-38  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  43.48 
 
 
265 aa  157  1e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  43.42 
 
 
264 aa  157  2e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  38.34 
 
 
270 aa  155  6e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  42.29 
 
 
265 aa  155  7e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  43.25 
 
 
263 aa  153  2e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  37.65 
 
 
263 aa  153  2.9999999999999998e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  39.34 
 
 
265 aa  151  8e-36  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  47.06 
 
 
271 aa  149  4e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  39.74 
 
 
266 aa  148  7e-35  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  39.91 
 
 
266 aa  147  1.0000000000000001e-34  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  39.34 
 
 
281 aa  147  2.0000000000000003e-34  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  39.34 
 
 
281 aa  147  2.0000000000000003e-34  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  42.36 
 
 
263 aa  146  3e-34  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  39.34 
 
 
266 aa  146  4.0000000000000006e-34  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  40.61 
 
 
262 aa  145  5e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  38.93 
 
 
266 aa  145  7.0000000000000006e-34  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  39.91 
 
 
266 aa  145  8.000000000000001e-34  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  38.11 
 
 
265 aa  143  2e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  40.35 
 
 
264 aa  144  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  41.2 
 
 
255 aa  144  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  39.06 
 
 
266 aa  144  2e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  36.84 
 
 
267 aa  143  3e-33  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  37.98 
 
 
266 aa  142  4e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  41.39 
 
 
267 aa  142  5e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  40.61 
 
 
262 aa  142  6e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  38.86 
 
 
267 aa  141  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  30.56 
 
 
265 aa  140  9.999999999999999e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  35.77 
 
 
264 aa  140  1.9999999999999998e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  40 
 
 
271 aa  139  3e-32  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  30.56 
 
 
265 aa  140  3e-32  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  40.27 
 
 
264 aa  139  4.999999999999999e-32  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  43.32 
 
 
283 aa  139  6e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  43.28 
 
 
269 aa  138  8.999999999999999e-32  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  33.98 
 
 
256 aa  138  8.999999999999999e-32  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  35.29 
 
 
265 aa  137  1e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  39.3 
 
 
271 aa  138  1e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  39.37 
 
 
262 aa  137  2e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  41.59 
 
 
267 aa  136  3.0000000000000003e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  40.83 
 
 
271 aa  136  4e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  37.74 
 
 
257 aa  135  7.000000000000001e-31  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  31.58 
 
 
259 aa  134  1.9999999999999998e-30  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  40 
 
 
264 aa  133  1.9999999999999998e-30  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  39.04 
 
 
266 aa  133  3e-30  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  36.8 
 
 
266 aa  133  3e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  37.15 
 
 
270 aa  133  3e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  40 
 
 
264 aa  132  3.9999999999999996e-30  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  31.58 
 
 
259 aa  132  3.9999999999999996e-30  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  37.45 
 
 
267 aa  132  3.9999999999999996e-30  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  42.62 
 
 
268 aa  133  3.9999999999999996e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  38.4 
 
 
266 aa  132  5e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  41.83 
 
 
269 aa  131  9e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  39.84 
 
 
259 aa  131  1.0000000000000001e-29  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  36.96 
 
 
260 aa  131  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  39.56 
 
 
262 aa  131  1.0000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  34.66 
 
 
255 aa  131  1.0000000000000001e-29  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  36.22 
 
 
269 aa  130  2.0000000000000002e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  32.8 
 
 
260 aa  130  2.0000000000000002e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  37.12 
 
 
269 aa  130  2.0000000000000002e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  37.17 
 
 
260 aa  128  7.000000000000001e-29  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  41.67 
 
 
271 aa  128  1.0000000000000001e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  38.67 
 
 
262 aa  126  3e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  37.6 
 
 
259 aa  126  3e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  37.11 
 
 
269 aa  125  4.0000000000000003e-28  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  39.11 
 
 
262 aa  126  4.0000000000000003e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
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