Gene Paes_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0281 
Symbol 
ID6460645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp297288 
End bp298055 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID642724273 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002014985 
Protein GI194333125 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000634692 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00117931 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTTACA CCCTGATTAC CGGAGCATCG ACGGGGATCG GCAAGGCATT TGCCCTCGAG 
TTCGCCCGTT GCGGGCATAA TCTTGTGCTT GTTGCCCGCA CAAAGGGTCG CCTGGAAGAA
CTTGCTTCAG AGATCCGGCG CTGCAATCCT GTCAATGTCA GGATCTGCAT AATGGATTTT
TCCGATCCGG CATCTGCAGA GCAGGTCTAT CGGTTTTGCC GAAAACATGC GCTTGAGGTT
GATGTGCTGG TTAACTGTGC AGGTTTCGGC TACGCGGGAG GCTTTGATTC CATGCCTTTG
AGCGCCATTG AGGAGATGAT GCAGGTCAAT ATGCTTGCAC TTGCAAAACT GACCCGTCTG
TTTGTTCAGC ATATGGTTGC GGGGGGAGTC GGCAGTGTTA TCAATATCGC TTCGATGGGC
GGATTTCAGG GCGTGGCGTT TATCGGGCTG TATGCTGCAA CCAAGTCATT CATCATTACG
CTTGGCGAGG CGTTGCATGA GGAATTTCGT GATAAGGGCA TCCGGGTTGT AACGGTCTGT
CCGGGGTATA TCAAAACGGA TTTTCATGCC CGGTCAGGTC AGAACCCTTC ATTGAGCATG
CTTCCTGTCT ATGATACTTC CGTTGTCGTC AGGGCATCGA TCAAAGGGCT TGCAAAGAAC
CGTGTACTGG TTTTTCCAAC ACTCCTTGAC TTTTTGCTTG TCTTTCTGCA GCGGTTCACT
CCACGGCAGA TAGTTCTGAA AATCGCCGCA TTTCTGGCGC CCCTGTAG
 
Protein sequence
MSYTLITGAS TGIGKAFALE FARCGHNLVL VARTKGRLEE LASEIRRCNP VNVRICIMDF 
SDPASAEQVY RFCRKHALEV DVLVNCAGFG YAGGFDSMPL SAIEEMMQVN MLALAKLTRL
FVQHMVAGGV GSVINIASMG GFQGVAFIGL YAATKSFIIT LGEALHEEFR DKGIRVVTVC
PGYIKTDFHA RSGQNPSLSM LPVYDTSVVV RASIKGLAKN RVLVFPTLLD FLLVFLQRFT
PRQIVLKIAA FLAPL