Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0281 |
Symbol | |
ID | 6460645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 297288 |
End bp | 298055 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642724273 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002014985 |
Protein GI | 194333125 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000634692 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00117931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTTACA CCCTGATTAC CGGAGCATCG ACGGGGATCG GCAAGGCATT TGCCCTCGAG TTCGCCCGTT GCGGGCATAA TCTTGTGCTT GTTGCCCGCA CAAAGGGTCG CCTGGAAGAA CTTGCTTCAG AGATCCGGCG CTGCAATCCT GTCAATGTCA GGATCTGCAT AATGGATTTT TCCGATCCGG CATCTGCAGA GCAGGTCTAT CGGTTTTGCC GAAAACATGC GCTTGAGGTT GATGTGCTGG TTAACTGTGC AGGTTTCGGC TACGCGGGAG GCTTTGATTC CATGCCTTTG AGCGCCATTG AGGAGATGAT GCAGGTCAAT ATGCTTGCAC TTGCAAAACT GACCCGTCTG TTTGTTCAGC ATATGGTTGC GGGGGGAGTC GGCAGTGTTA TCAATATCGC TTCGATGGGC GGATTTCAGG GCGTGGCGTT TATCGGGCTG TATGCTGCAA CCAAGTCATT CATCATTACG CTTGGCGAGG CGTTGCATGA GGAATTTCGT GATAAGGGCA TCCGGGTTGT AACGGTCTGT CCGGGGTATA TCAAAACGGA TTTTCATGCC CGGTCAGGTC AGAACCCTTC ATTGAGCATG CTTCCTGTCT ATGATACTTC CGTTGTCGTC AGGGCATCGA TCAAAGGGCT TGCAAAGAAC CGTGTACTGG TTTTTCCAAC ACTCCTTGAC TTTTTGCTTG TCTTTCTGCA GCGGTTCACT CCACGGCAGA TAGTTCTGAA AATCGCCGCA TTTCTGGCGC CCCTGTAG
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Protein sequence | MSYTLITGAS TGIGKAFALE FARCGHNLVL VARTKGRLEE LASEIRRCNP VNVRICIMDF SDPASAEQVY RFCRKHALEV DVLVNCAGFG YAGGFDSMPL SAIEEMMQVN MLALAKLTRL FVQHMVAGGV GSVINIASMG GFQGVAFIGL YAATKSFIIT LGEALHEEFR DKGIRVVTVC PGYIKTDFHA RSGQNPSLSM LPVYDTSVVV RASIKGLAKN RVLVFPTLLD FLLVFLQRFT PRQIVLKIAA FLAPL
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