More than 300 homologs were found in PanDaTox collection
for query gene HS_1022 on replicon NC_008309
Organism: Haemophilus somnus 129PT



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008309  HS_1022  recombination protein 2  100 
 
 
808 aa  1644    Haemophilus somnus 129PT  Bacteria  normal  0.949854  n/a   
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  34.77 
 
 
737 aa  369  1e-101  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_012912  Dd1591_2310  hypothetical protein  32.72 
 
 
793 aa  329  1.0000000000000001e-88  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1074  hypothetical protein  30.76 
 
 
754 aa  322  1.9999999999999998e-86  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.361238  normal 
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  30.76 
 
 
754 aa  319  1e-85  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
NC_010498  EcSMS35_2207  hypothetical protein  30.51 
 
 
754 aa  317  6e-85  Escherichia coli SMS-3-5  Bacteria  normal  0.01066  normal  0.239269 
 
 
-
 
CP001509  ECD_00917  conserved inner membrane protein  30.9 
 
 
754 aa  314  4.999999999999999e-84  Escherichia coli BL21(DE3)  Bacteria  normal  0.578469  n/a   
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  30.9 
 
 
754 aa  314  4.999999999999999e-84  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
NC_012892  B21_00924  hypothetical protein  30.9 
 
 
754 aa  314  4.999999999999999e-84  Escherichia coli BL21  Bacteria  normal  0.630751  n/a   
 
 
-
 
NC_010468  EcolC_2683  hypothetical protein  30.9 
 
 
754 aa  314  4.999999999999999e-84  Escherichia coli ATCC 8739  Bacteria  normal  0.692344  normal  0.226957 
 
 
-
 
NC_009436  Ent638_1432  hypothetical protein  30.16 
 
 
754 aa  303  8.000000000000001e-81  Enterobacter sp. 638  Bacteria  normal  0.0687894  normal 
 
 
-
 
NC_011149  SeAg_B0989  hypothetical protein  31 
 
 
737 aa  299  1e-79  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1097  hypothetical protein  31 
 
 
756 aa  298  2e-79  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  29.97 
 
 
752 aa  292  2e-77  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  31.04 
 
 
768 aa  288  2.9999999999999996e-76  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1048  hypothetical protein  30.62 
 
 
737 aa  283  1e-74  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.486822 
 
 
-
 
NC_011080  SNSL254_A1016  hypothetical protein  30.81 
 
 
737 aa  281  2e-74  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.619127  normal 
 
 
-
 
NC_011083  SeHA_C1081  hypothetical protein  30.71 
 
 
737 aa  282  2e-74  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.30814  normal  0.0474337 
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  29.99 
 
 
765 aa  280  8e-74  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  28.31 
 
 
752 aa  277  6e-73  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  28.98 
 
 
752 aa  276  1.0000000000000001e-72  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  31.73 
 
 
860 aa  275  4.0000000000000004e-72  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  29.09 
 
 
783 aa  267  5e-70  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  28.46 
 
 
769 aa  266  1e-69  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  28.89 
 
 
773 aa  265  4e-69  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  29.02 
 
 
773 aa  263  1e-68  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_008345  Sfri_2389  DNA internalization-related competence protein ComEC/Rec2  29.43 
 
 
831 aa  259  1e-67  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.00142105  n/a   
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  29.34 
 
 
767 aa  256  1.0000000000000001e-66  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  27.88 
 
 
773 aa  256  1.0000000000000001e-66  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  29.29 
 
 
774 aa  249  1e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1637  DNA internalization-related competence protein ComEC/Rec2  29.4 
 
 
761 aa  245  1.9999999999999999e-63  Shewanella loihica PV-4  Bacteria  normal  0.594703  normal 
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  27.79 
 
 
839 aa  243  1e-62  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  28.38 
 
 
840 aa  242  2e-62  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  29.08 
 
 
765 aa  233  1e-59  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  27.5 
 
 
841 aa  223  9.999999999999999e-57  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  27.89 
 
 
747 aa  217  7e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_006368  lpp0680  hypothetical protein  26.55 
 
 
735 aa  213  1e-53  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0663  hypothetical protein  26.17 
 
 
735 aa  212  2e-53  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  27.17 
 
 
778 aa  205  3e-51  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2209  hypothetical protein  32.56 
 
 
747 aa  204  8e-51  Dickeya dadantii Ech703  Bacteria  normal  0.785174  n/a   
 
 
-
 
NC_009708  YpsIP31758_2578  hypothetical protein  36.71 
 
 
763 aa  196  2e-48  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0251432  n/a   
 
 
-
 
NC_010465  YPK_2666  hypothetical protein  36.71 
 
 
763 aa  196  2e-48  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  33.26 
 
 
763 aa  194  5e-48  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_010159  YpAngola_A1958  hypothetical protein  36.71 
 
 
763 aa  194  6e-48  Yersinia pestis Angola  Bacteria  hitchhiker  0.0001218  normal  0.195131 
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  33.74 
 
 
763 aa  191  5.999999999999999e-47  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01854  DNA internalization-related competence protein ComEC/Rec2  25.27 
 
 
867 aa  189  2e-46  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  27.98 
 
 
758 aa  186  2.0000000000000003e-45  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  26.32 
 
 
802 aa  181  2.9999999999999997e-44  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  26.42 
 
 
825 aa  179  2e-43  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  27.39 
 
 
833 aa  177  6e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  25.07 
 
 
801 aa  177  8e-43  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  25.95 
 
 
822 aa  174  3.9999999999999995e-42  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  26.59 
 
 
861 aa  174  6.999999999999999e-42  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  25.53 
 
 
832 aa  172  3e-41  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  35.64 
 
 
783 aa  171  4e-41  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  35.22 
 
 
783 aa  171  5e-41  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  24.5 
 
 
800 aa  171  6e-41  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  34.5 
 
 
795 aa  169  2e-40  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  25 
 
 
878 aa  166  2.0000000000000002e-39  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  25.99 
 
 
801 aa  163  1e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_010658  SbBS512_E2411  DNA internalization-related competence protein ComEC/Rec2 homolog  34.98 
 
 
343 aa  159  2e-37  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  34.88 
 
 
812 aa  159  2e-37  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  34.24 
 
 
762 aa  157  9e-37  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  37.02 
 
 
798 aa  153  1e-35  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  23.47 
 
 
929 aa  150  1.0000000000000001e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_007954  Sden_2200  DNA internalization-related competence protein ComEC/Rec2  34.81 
 
 
873 aa  147  1e-33  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  34.78 
 
 
839 aa  146  2e-33  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  36.12 
 
 
766 aa  140  6e-32  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  33.85 
 
 
840 aa  141  6e-32  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_002936  DET0024  DNA internalization-related competence protein ComEC/Rec2  26.77 
 
 
795 aa  140  7.999999999999999e-32  Dehalococcoides ethenogenes 195  Bacteria  normal  0.0591884  n/a   
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  33.33 
 
 
784 aa  140  1e-31  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  34.56 
 
 
851 aa  139  2e-31  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_009674  Bcer98_3051  DNA internalization-related competence protein ComEC/Rec2  25.55 
 
 
780 aa  139  2e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.755952  n/a   
 
 
-
 
NC_010320  Teth514_2092  DNA internalization-related competence protein ComEC/Rec2  25.21 
 
 
757 aa  138  4e-31  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000797686  n/a   
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  33.07 
 
 
738 aa  136  9.999999999999999e-31  Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  33.74 
 
 
801 aa  135  1.9999999999999998e-30  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  35.22 
 
 
845 aa  136  1.9999999999999998e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  33.2 
 
 
799 aa  134  7.999999999999999e-30  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_012793  GWCH70_2449  DNA internalization-related competence protein ComEC/Rec2  27.66 
 
 
759 aa  134  9e-30  Geobacillus sp. WCH70  Bacteria  normal  0.327807  n/a   
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  30.39 
 
 
738 aa  132  2.0000000000000002e-29  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  34.07 
 
 
766 aa  131  4.0000000000000003e-29  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  33.07 
 
 
737 aa  131  5.0000000000000004e-29  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_012560  Avin_14730  DNA internalization-related competence protein ComA  32.64 
 
 
711 aa  130  1.0000000000000001e-28  Azotobacter vinelandii DJ  Bacteria  normal  0.0603479  n/a   
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  31.02 
 
 
845 aa  128  4.0000000000000003e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  30.04 
 
 
737 aa  127  7e-28  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  32.79 
 
 
776 aa  127  8.000000000000001e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  23.81 
 
 
778 aa  126  2e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  31.71 
 
 
741 aa  126  2e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  31.85 
 
 
740 aa  125  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  32.62 
 
 
770 aa  124  6e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  35.84 
 
 
860 aa  124  8e-27  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  33.89 
 
 
948 aa  124  9e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  35.4 
 
 
747 aa  124  9e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  29.12 
 
 
847 aa  123  9.999999999999999e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  31.25 
 
 
772 aa  121  3.9999999999999996e-26  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  31.56 
 
 
842 aa  120  9e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  120  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_009943  Dole_0767  DNA internalization-related competence protein ComEC/Rec2  22.8 
 
 
840 aa  120  9.999999999999999e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  120  9.999999999999999e-26  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  31.15 
 
 
856 aa  120  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
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