| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2200 |
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| Symbol | |
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| ID | 4018692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2611337 |
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| End bp | 2613958 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956223 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_563204 |
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| Protein GI | 91793553 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGAT ATATTTACGG CTTTTGTGCT TGTTTACTAT CAAGTTTACT CTGGCCTGCG
CTGTTCGCGC CATGGACCTG GCCGATCCTC ATCATGGTGT TCGTTATTTC GAGAAAAACC
TCAGGTTTTT TTTGCGGAAT GCTCTTGGGT GCCTTGTGGA TTTCATATTG TTTTTATTCA
TTATTTAACC AGCACGAGCC CGCAATGACT CAGCATGGGG AGTTCACTGG GCAAATAGTA
TCACTAGTTC ACCAAGAGCG CGACTGGATA AGTTTTGACG TGAAGGTGAT TGACCCACAG
TTTAGGCTAT TTCCGCGTTT TTATCGTTTA AATTGGCGTG AGCCGCTGCC GCTCGCCTTA
GGGCAAGTGT GGCGTTTTAA CGCTAAGATG AAAGGCATTA CTAGCTTGCT CAATGAAGGC
GGTTTTAATC AGCAAAAATA CTGGCTAAGT CAGCACTTAG TGGCCAGAGG AAAGGTGACC
GAGGCGAGTT TGTTGAATAA ATCGCAGAGC TTACGCCAAG GGTTACAGGA GAGATTAAGC
CCCATTCTTA TGTCTCTTGA TGGCGGGGAT ATTTTGCAGG CCTTATTACT GGGTGACAAG
AAAGGGATAA CCCCAGCGCG CTGGCAAGAC TTAAGGCGTA CGGGAGCGGG GCACTTAGTG
GCCATTTCAG GCTTACATGT GAGCGTGGTT TTTGCTGCAG TCTTATTGTT AAGCCTGCGT
CTGTTGGTCT TAGGTTACCC TTGCGAAAGC CTACGTAACT GGGTTGTCGC TATGGGAATA
GCCTTAGTTG TGGTGCTCTG TTATGGCTAT ATTGCAGGAT TTGCTATTGC CACTCAAAGG
GCGGTGCTCA TGCTGCTGCT CTTGGTAGGA TTAAGCCTAC TTAGGCAGTT TAGCTCCCCT
TGGGAGCGAT TAATTTGGGC ATTGTGTGCC GTGCTATTGT TCGACCCTTT CGCGCCGTTA
AGTGCAGGGT TTTGGCTTTC ATTTTGTGCC TTAAGCATCA TTTTACTGAG TGTCACACTC
GATAAGGTCA GTGGGAATGC CCAGGAAAAG TCCCATGATG CAACAAAACA AACTGTCATT
CATCAAGAGC CAGCGTCAGC ACAATGGGCT TCTTTTGGAA TAATCGTCAA GCGTGTTCCT
TGGCGAGAAA AGCTTGACCT ATGGGGGGAT TCTTTAAAGC ATTTTGCGGC AAGCTTGTGG
CGTATTCAAT GGCGCCTCGC CTTAGGGCTT GGGATACTGC AATTATTGCT ATTTGGCACA
GCGGCCCTTC ACAGCATTTG GCTTAATTTG TTGTTCGTGC CTTGGTTTAG TTTCATCGTC
ATCCCACTGG CCTTGTTAAG CCTTATTCTC TGGCTCGTTT GCTACTTAGG CTATTGGCTT
ATGCTAACGC TGTTGGCTTA TGGGGCCGCC GCTGTTATCG GGTTATCAAG GTTTATTGAT
CATGAGGCTC ATTTTTTTCA GCCAGATTTT TTGCACTCTC TTTCATTGTC GCCTTTATTG
TCCTTAGATG GATTTGTTAA CACCCAAGTC ATATCAGCGT TTGCCCGCGA GCTGAGTTTG
AGCTTAGGGC CCAAGCTATT TTATGTTGCC GAATTAAGCT TGACGCCATT TTTGTGGATT
TTAGATGCCA GCAAGCATTT ACCTTGGGCT GAGTTTAGTC TTGCAACCTT TACCTTAGCG
CAAGTGATAT TGGCCTTAAT AGGGGGGGTG TTACTGCTTT ATCAAAGATG CAGGCTTTGG
CAGATAATGA CCATGAGCCT TTGCTTGCCG CTGCTGTTTA CTGGACTTAT GGCGCTTAGC
AGTCAGCTAG GCTTCAATCG ATTACAGGAT GAAGGGGTAA CGGAAACAGA CTGGCAGCTC
CATGTGCTGG ATGTGGGCCA AGGGAGCGCC ATCGTGGTGC AGCAAGGCAA ATACGGCCTC
ATCTATGATA CTGGCGCAGC TTATGGCCTC GATTTTAGTT ATGCCAAGCG GGTTATTCTG
CCCTTTCTCA TCGCACGGGG AATATCTGAG CCCGAGTATT TAGTGTTAAG TCATGATGAT
AACGACCATA TGGGCGGTGC CAAGGTGTTG ATGGCCGCAT TCCCTTCGAT GAACGTCATC
AGTGATATTG CCCGATTTGC AGATGAAACG TGCCGGCAAG CGCCGTTTAG CTGGCGCGCA
TTGACCCTTG AATTGATGAG CGCGGCGACT GAGCCTAAAG ATAACAATGC CTCTTGCGTC
ATAAGGATAG GTAATCACCA TGGACGAGCC TTACTCACGG GAGACATAGA GGCGCTGCGA
GAATTTAAAC TGTTGCAACA AGGCGTACCT ATGGCTGCTG AAGTCTTACT CGCGCCGCAC
CATGGCAGTA ACACCTCCTC TACAGCGGCT TTCTTGCAAG CCGTTTCGCC TTATTCTGTT
ATTTTTAGTG CGGGCTTTGC TAATCAGTAT GGTTTCCCTA AACCTCAAGT GCTAGCACGC
TATCAGTCAC AGGGCATAGA GCGCTATTCC ACAGGGGAAT TGGGGCAAAT TAGCGTAGAT
TTTAGCCCTT CGTCTATCCG TATTCGCGGC TATCGCACTG AGCGTGCGCC ATTTTGGTAT
AACCAAGTGT TTAGATTTGG TTCGAGCCAA AAACCAGAGT AG
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| Protein sequence | MNGYIYGFCA CLLSSLLWPA LFAPWTWPIL IMVFVISRKT SGFFCGMLLG ALWISYCFYS
LFNQHEPAMT QHGEFTGQIV SLVHQERDWI SFDVKVIDPQ FRLFPRFYRL NWREPLPLAL
GQVWRFNAKM KGITSLLNEG GFNQQKYWLS QHLVARGKVT EASLLNKSQS LRQGLQERLS
PILMSLDGGD ILQALLLGDK KGITPARWQD LRRTGAGHLV AISGLHVSVV FAAVLLLSLR
LLVLGYPCES LRNWVVAMGI ALVVVLCYGY IAGFAIATQR AVLMLLLLVG LSLLRQFSSP
WERLIWALCA VLLFDPFAPL SAGFWLSFCA LSIILLSVTL DKVSGNAQEK SHDATKQTVI
HQEPASAQWA SFGIIVKRVP WREKLDLWGD SLKHFAASLW RIQWRLALGL GILQLLLFGT
AALHSIWLNL LFVPWFSFIV IPLALLSLIL WLVCYLGYWL MLTLLAYGAA AVIGLSRFID
HEAHFFQPDF LHSLSLSPLL SLDGFVNTQV ISAFARELSL SLGPKLFYVA ELSLTPFLWI
LDASKHLPWA EFSLATFTLA QVILALIGGV LLLYQRCRLW QIMTMSLCLP LLFTGLMALS
SQLGFNRLQD EGVTETDWQL HVLDVGQGSA IVVQQGKYGL IYDTGAAYGL DFSYAKRVIL
PFLIARGISE PEYLVLSHDD NDHMGGAKVL MAAFPSMNVI SDIARFADET CRQAPFSWRA
LTLELMSAAT EPKDNNASCV IRIGNHHGRA LLTGDIEALR EFKLLQQGVP MAAEVLLAPH
HGSNTSSTAA FLQAVSPYSV IFSAGFANQY GFPKPQVLAR YQSQGIERYS TGELGQISVD
FSPSSIRIRG YRTERAPFWY NQVFRFGSSQ KPE
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