More than 300 homologs were found in PanDaTox collection
for query gene Shel_17930 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_17930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
258 aa  535  1e-151  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.265474  normal 
 
 
-
 
NC_007404  Tbd_1399  transcriptional regulator NarL  31.68 
 
 
219 aa  65.1  0.000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0261138  normal 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  46.34 
 
 
224 aa  63.5  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  36.73 
 
 
220 aa  62.8  0.000000005  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_011886  Achl_1021  transcriptional regulator, LuxR family  36.92 
 
 
347 aa  62.8  0.000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.15 
 
 
213 aa  62.8  0.000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  40 
 
 
212 aa  62.4  0.000000006  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  52.54 
 
 
207 aa  62.4  0.000000007  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  57.69 
 
 
221 aa  62  0.000000009  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  52.46 
 
 
212 aa  61.2  0.00000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  30.48 
 
 
209 aa  61.2  0.00000001  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  46.38 
 
 
223 aa  62  0.00000001  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  53.45 
 
 
222 aa  60.8  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  39.51 
 
 
239 aa  60.8  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  41.67 
 
 
204 aa  61.2  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  46.25 
 
 
228 aa  61.2  0.00000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0333  LuxR family transcriptional regulator  46.03 
 
 
141 aa  60.5  0.00000002  Maricaulis maris MCS10  Bacteria  normal  0.800894  normal  0.0115404 
 
 
-
 
NC_008740  Maqu_1584  regulatory protein, LuxR  35.66 
 
 
916 aa  60.8  0.00000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  46.34 
 
 
216 aa  61.2  0.00000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  49.23 
 
 
209 aa  60.5  0.00000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  43.21 
 
 
222 aa  60.1  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  31.21 
 
 
219 aa  60.1  0.00000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0804  two component LuxR family transcriptional regulator  41.89 
 
 
204 aa  60.1  0.00000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  58 
 
 
227 aa  59.7  0.00000004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3502  two component LuxR family transcriptional regulator  50.88 
 
 
228 aa  60.1  0.00000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4382  regulatory protein, LuxR  53.33 
 
 
1006 aa  60.1  0.00000004  Nocardioides sp. JS614  Bacteria  normal  0.172901  n/a   
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  48.44 
 
 
208 aa  59.7  0.00000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  54.55 
 
 
225 aa  59.3  0.00000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  40.23 
 
 
216 aa  59.3  0.00000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009379  Pnuc_0564  two component LuxR family transcriptional regulator  41.18 
 
 
197 aa  59.3  0.00000006  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  40 
 
 
339 aa  58.9  0.00000007  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  29.05 
 
 
209 aa  58.9  0.00000007  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal 
 
 
-
 
NC_009953  Sare_2352  two component LuxR family transcriptional regulator  48.15 
 
 
230 aa  58.5  0.0000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.139824 
 
 
-
 
NC_011205  SeD_A3468  LysR family transcriptional regulator  32.38 
 
 
248 aa  58.2  0.0000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0530935  normal 
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  40.51 
 
 
212 aa  58.5  0.0000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4027  LuxR family transcriptional regulator  44.93 
 
 
275 aa  58.5  0.0000001  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3086  LuxR family transcriptional regulator  47.46 
 
 
292 aa  58.2  0.0000001  Jannaschia sp. CCS1  Bacteria  normal  normal  0.375824 
 
 
-
 
NC_012791  Vapar_4377  two component transcriptional regulator, LuxR family  48.21 
 
 
237 aa  58.2  0.0000001  Variovorax paradoxus S110  Bacteria  normal  0.237342  n/a   
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  48.39 
 
 
222 aa  58.2  0.0000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_1927  LuxR family transcriptional regulator  36.36 
 
 
257 aa  58.5  0.0000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  49.15 
 
 
253 aa  58.2  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3299  LysR-family transcriptional regulator  32.38 
 
 
227 aa  58.2  0.0000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.212015  normal 
 
 
-
 
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  56 
 
 
215 aa  58.2  0.0000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.104312 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  36.36 
 
 
213 aa  58.2  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_013889  TK90_1314  transcriptional regulator, LuxR family  46.97 
 
 
204 aa  57.8  0.0000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.404844  normal 
 
 
-
 
NC_010623  Bphy_5343  LuxR family transcriptional regulator  37.5 
 
 
361 aa  57.4  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0342945 
 
 
-
 
NC_011891  A2cp1_0906  transcriptional regulator, LuxR family  48.39 
 
 
208 aa  57.8  0.0000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.000000244022  n/a   
 
 
-
 
NC_011080  SNSL254_A3373  LysR family transcriptional regulator  32.38 
 
 
227 aa  57.8  0.0000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.322322  normal 
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  47.37 
 
 
222 aa  57.4  0.0000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  53.85 
 
 
227 aa  57.4  0.0000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  52.46 
 
 
206 aa  57.8  0.0000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  40.26 
 
 
226 aa  57.8  0.0000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_010524  Lcho_1374  LuxR family transcriptional regulator  47.62 
 
 
267 aa  57.4  0.0000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_3355  two component LuxR family transcriptional regulator  50.94 
 
 
232 aa  57.8  0.0000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  26.88 
 
 
209 aa  57.4  0.0000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  38.1 
 
 
217 aa  57.8  0.0000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  39.74 
 
 
225 aa  57.4  0.0000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  35.24 
 
 
208 aa  57.4  0.0000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  47.54 
 
 
209 aa  57.4  0.0000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0799  response regulator receiver protein  49.18 
 
 
204 aa  57.4  0.0000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.403434 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  37.8 
 
 
224 aa  57  0.0000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  35.85 
 
 
212 aa  57  0.0000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40 
 
 
223 aa  57  0.0000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_009767  Rcas_1228  LuxR family transcriptional regulator  42.31 
 
 
204 aa  56.6  0.0000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.118696  normal 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  50.98 
 
 
221 aa  57  0.0000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0164  response regulator receiver protein  34.51 
 
 
128 aa  57  0.0000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  34.62 
 
 
218 aa  57  0.0000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  46.43 
 
 
306 aa  57  0.0000003  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  42.86 
 
 
218 aa  57  0.0000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3366  LysR family transcriptional regulator  32.38 
 
 
227 aa  56.6  0.0000004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.857101 
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  46.97 
 
 
207 aa  56.6  0.0000004  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  34.18 
 
 
221 aa  56.6  0.0000004  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  44.83 
 
 
297 aa  56.6  0.0000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0929  two component LuxR family transcriptional regulator  29.05 
 
 
209 aa  56.6  0.0000004  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000567962  normal 
 
 
-
 
NC_009380  Strop_2235  regulatory protein, LuxR  48.15 
 
 
231 aa  56.6  0.0000004  Salinispora tropica CNB-440  Bacteria  normal  0.422182  normal 
 
 
-
 
NC_009439  Pmen_1766  two component LuxR family transcriptional regulator  30.59 
 
 
203 aa  56.6  0.0000004  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00488071  normal 
 
 
-
 
NC_013757  Gobs_2577  transcriptional regulator, LuxR family  33.62 
 
 
372 aa  56.6  0.0000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0769027  n/a   
 
 
-
 
NC_011149  SeAg_B3294  LysR-family transcriptional regulator  32.38 
 
 
248 aa  56.2  0.0000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.42203  n/a   
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  36.67 
 
 
218 aa  56.2  0.0000005  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.33 
 
 
464 aa  56.2  0.0000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  46.88 
 
 
220 aa  56.2  0.0000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1505  transcriptional regulator, LuxR family  49.06 
 
 
522 aa  56.2  0.0000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  34.04 
 
 
228 aa  56.2  0.0000005  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  47.46 
 
 
205 aa  56.2  0.0000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  34 
 
 
216 aa  56.2  0.0000005  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  33.81 
 
 
215 aa  56.2  0.0000005  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  36.67 
 
 
218 aa  56.2  0.0000005  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal 
 
 
-
 
NC_013131  Caci_5719  two component transcriptional regulator, LuxR family  39.77 
 
 
232 aa  56.2  0.0000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  46.43 
 
 
301 aa  56.2  0.0000006  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  31.21 
 
 
219 aa  56.2  0.0000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  46.15 
 
 
493 aa  55.8  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  37.17 
 
 
232 aa  55.8  0.0000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  46.88 
 
 
207 aa  55.8  0.0000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_32990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.85 
 
 
217 aa  56.2  0.0000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.227707 
 
 
-
 
NC_013441  Gbro_0184  regulatory protein LuxR  53.45 
 
 
489 aa  55.8  0.0000006  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  45.16 
 
 
207 aa  55.8  0.0000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_009511  Swit_4199  regulatory protein, LuxR  37.5 
 
 
855 aa  55.8  0.0000006  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.142655 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  46.67 
 
 
211 aa  55.8  0.0000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_008228  Patl_0761  LuxR family transcriptional regulator  32.23 
 
 
881 aa  55.8  0.0000007  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  33.9 
 
 
206 aa  55.8  0.0000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
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