Gene Daci_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0218 
Symbol 
ID5745754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp245771 
End bp246790 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID641295280 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001561249 
Protein GI160895667 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGA ACCCGCAAAG GCCACAGATG ACGACCGCCG ACAGCAGCAG ACACCCCAGC 
CACCCCCCTC ACAACGCCCA CGTCATCCTT GTGGTGGACG ACGCGCTGGA CAGCCTGCGC
ATGCTGTGCG ACGCGCTGGC CGCCGAAGGC TACGTGGTGC TCGCCGCCCG CGACGCCGAC
GAGGCCCTGC AGCGCTTCGC CCTCACCGTG CCCGACGGCG TGCTGCTGGA CGCCGTCATG
CCCGGCATGG ACGGCTTCAC GCTGTGCCGC ACGCTCAAGG CCACGCCGGC CTGGGCCCAT
GTGCCCGTGG TGTTCATGAC CGGCCTGTCG GACACGGACC AGATCATCCG CGGCTTTGCC
AGCGGTGGCG TGGACTACGT GGTCAAGCCG CTGCGCATCC CCGAGGTGCT GGTGCGCCTG
GCCACCCATG TGCGCAACGC CCGCGCCACG CGCCAGGCGC AGGAGGCCGT GGACGTGGCG
GGGCTGGGCG TGGTGGTGCT CGACGGCCAG GGCCGCGTGG CCTGGCGCTC GCCCCAGGCA
TCGCGCTGGC TGGAGGAGGC CTTTGCGGAC CAGCCCTTCC CGCTGGAGGC GGCCGGGGAC
TGGCTGGCCG GCGCCCGCCA GCCGGATCAG CACGGCAAAG CGGATCAGCC CGGCCAGGCG
GATCAGGAGG GCCAGCCCGC CCCCCAGGAT CTGGCGCTGG CCCTGGCCGA TGGCCGCCAG
CTGCTGGCGC GCCACATGGG CGCCAGCGGC CTGGGGGAGT CGATGGTGCT GCTCAGCCAC
GAGGCGCCGC AGACGCCTGC CGCGCGCCGG CTGCAGCAGG TGGCGCTCAC CCCGCGCGAG
ACCGAGGTGC TGTCATGGCT GAGCAAGGGC AAGACCAACC GTGACATCGC CGACATCCTG
GGCATGAGCC CGCGCACGGT GAACAAGCAC CTGGAGCACA TCTTCGAGAA ACTCGGCGTG
GAGACCCGCA CGGCCGCCGC CGCCGTGGCC GGTCAGTTGC TGCAGGCCGG CTCGCCCTGA
 
Protein sequence
MNENPQRPQM TTADSSRHPS HPPHNAHVIL VVDDALDSLR MLCDALAAEG YVVLAARDAD 
EALQRFALTV PDGVLLDAVM PGMDGFTLCR TLKATPAWAH VPVVFMTGLS DTDQIIRGFA
SGGVDYVVKP LRIPEVLVRL ATHVRNARAT RQAQEAVDVA GLGVVVLDGQ GRVAWRSPQA
SRWLEEAFAD QPFPLEAAGD WLAGARQPDQ HGKADQPGQA DQEGQPAPQD LALALADGRQ
LLARHMGASG LGESMVLLSH EAPQTPAARR LQQVALTPRE TEVLSWLSKG KTNRDIADIL
GMSPRTVNKH LEHIFEKLGV ETRTAAAAVA GQLLQAGSP