| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5719 |
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| Symbol | |
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| ID | 8337080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6601252 |
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| End bp | 6601950 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958823 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003116418 |
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| Protein GI | 256394854 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGCG TTCTGCTGGT GGACGACGCG CCGCTGCTGC GCATGGGCTT CCGTATGGTG
CTGGAGGCGC AGCCGGACGT CGCGGTCGTC GGCGAGGCCG GAGACGGCGC CGAGGCGGTG
GCGCTCGCCG CCGAGCTGCG CCCCGACGTG GTGCTGATGG ACGTGCGCAT GCCCGGCGTC
GACGGCATCG AGGCCACCGC GCGCATCAGC GCCGCGCAGC TGCCTTCGCG GGTCCTCATC
CTGACCACCT TCGATCTCGA CGAGTACGCC TTCGCCGCGC TGCGAGCCGG CGCCGCGGGC
TTCCTGCTGA AGAACGCGCA CCCGGCCGAT CTCATCGCGG GCATCCGCAC CGTGGCCGCC
GGGGACGGCG TGGTCGCCCC CCGCATCACG CGCCAGCTGA TCGAGGCCTT CGCCCGCCAG
ACCGACCCCG CCGCCACCGC CGCCGGCCCG CGCGCCGACG AGCGCCTGGA GCGCCTGGAG
CGCCTGACCG ACCGCGAACG CGAGGTCCTG GTCGAGATCG CGCGCGGCCA GTCCAACGCC
GAGATCGCCG AGACCTTGCA CCTGTCCGAG GCCACGGTGA AGACCCACGT CAGCCGCATC
CTGCCGAAGC TGGAGCTGCG CGACCGCGTG CAGGCGGTGG TGTTCGCCTA CGAGATCGGC
TTGGTCGCAG CGGGCTCACA GCCCGGCGCG GAGCGATAG
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| Protein sequence | MISVLLVDDA PLLRMGFRMV LEAQPDVAVV GEAGDGAEAV ALAAELRPDV VLMDVRMPGV
DGIEATARIS AAQLPSRVLI LTTFDLDEYA FAALRAGAAG FLLKNAHPAD LIAGIRTVAA
GDGVVAPRIT RQLIEAFARQ TDPAATAAGP RADERLERLE RLTDREREVL VEIARGQSNA
EIAETLHLSE ATVKTHVSRI LPKLELRDRV QAVVFAYEIG LVAAGSQPGA ER
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