| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1374 |
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| Symbol | |
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| ID | 6159992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1457425 |
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| End bp | 1458228 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664128 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001790407 |
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| Protein GI | 171058058 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR03020] transcriptional regulator EpsA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGC CGCAGTCTGT CGAACGGGTT CCGGTCGAGC CCGAGGTGTC GCTGCAACCG
CAGGACATCG AGGCCCTGGC CCTGAATCTG GACGCCTCGC TCAACGTGCA CACACGCTCG
CATTTCTTCA CCTGGACCCA GGGTCTGCTG CAGGGGCTGA TCCACCACGA GGCCCTGATC
TGCGTGCTGC GCTGCCCTGA ATCGGCGACC TGGCGGGTCG ACAGTTTTTC GACCCGCGTG
GCCGACAGCA CGGTCTTCGC CGCGCCCCTG CTGCGCGACA TCGCGCTGGT GCCCCGGCTG
GTCGACGCCT GGAAGGGGGC GCATCACCTG CCGATCGTGC TGCCGGCGCG GCGCGACGGC
GTGCTCGGGT CGGGCGCATG GGTGGCCGAA CTCGAGCGCA TCGCCGCGAC CCGCCTGGCC
GTGCATGGCT GCCACGACAT CGACGGCGAC GCGAACTGCC TGTTCCTGCT GGCCTGCCAG
GGCGACAGCC CGGATCCGCG CGAACTGTGC CTGCTGCGGC TGGTCGTGCC TTTCCTGCGC
GAGGCCTGGG TGCGCTCGCA GATGATCGGC GGCCGGCACG ACGACCTGCC CGCACCGCAC
GGCCACGCCG TCATCACCGT GCGGGAGCAG GAGATCCTCA AGTGGATCTA CCTCGGCAAG
AGCAACAGCG AGATCGGACA GATCCTCGGC ATCAGTGCGC TGACGGTGAA GAACCACGTC
CAGAAGATGC TGCACAAGCT CAATGTGGTC AACCGGGCCC AGGCCGTCGG CCGCGCGATC
GAGGCCCACC TGATCCAGAT CTGA
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| Protein sequence | MPQPQSVERV PVEPEVSLQP QDIEALALNL DASLNVHTRS HFFTWTQGLL QGLIHHEALI
CVLRCPESAT WRVDSFSTRV ADSTVFAAPL LRDIALVPRL VDAWKGAHHL PIVLPARRDG
VLGSGAWVAE LERIAATRLA VHGCHDIDGD ANCLFLLACQ GDSPDPRELC LLRLVVPFLR
EAWVRSQMIG GRHDDLPAPH GHAVITVREQ EILKWIYLGK SNSEIGQILG ISALTVKNHV
QKMLHKLNVV NRAQAVGRAI EAHLIQI
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