| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0564 |
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| Symbol | |
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| ID | 5052088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 554642 |
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| End bp | 555235 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640470718 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001155348 |
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| Protein GI | 145588751 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCTG TGTCTTTGCT GATCGTTGAC GACCACCCGG TGTATAGGGA CGCCCTGCAC
CAGTTTTTAA CTCGGAAGTT CTTCTCTTCA GGCAACGAAG TCTATTCTGC GAATTCCATT
AAAGAGGGCT TAAAAATAGT CCAGGGGAAA GAGTCCAAGT GGATCATCCT CTTGGATCTA
TTGATACCAG ATTCAGAAAC ACAACTCTGC GGTATTAAAG AATTTAAGAA GCTAGAAGAA
GTAGTTGCAA TCGCCGCTAT TTCTGGGCTT GAAAAAGAAA CCTTAGAGCA AGAATGCATT
GAGGCTGGCT GTAGCATCTT CATTCCAAAG AGTAGCGACA CCTCATATAT ATATCAAAGT
CTTTGCGATC TCATGGGTCT TAACCCAGAT GAGGCTGAGT TAACACAGCT CACTGATAGG
CAAAAAGAAA TACTTGCTCA CATTTCTAAT GGCGACTCAA ATAAGATGAT TGCTTACTCA
TTAAATATCA GTGAACAGAC AGTGAAGGTT CATCTGGGCG AAATCTTCAA AAAAATAAAA
GTGTTCAATA GAACACAGGC TGTTATTAAA GCCAAAGAGA ATGGATGGGT ATAG
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| Protein sequence | MHSVSLLIVD DHPVYRDALH QFLTRKFFSS GNEVYSANSI KEGLKIVQGK ESKWIILLDL
LIPDSETQLC GIKEFKKLEE VVAIAAISGL EKETLEQECI EAGCSIFIPK SSDTSYIYQS
LCDLMGLNPD EAELTQLTDR QKEILAHISN GDSNKMIAYS LNISEQTVKV HLGEIFKKIK
VFNRTQAVIK AKENGWV
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