| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4027 |
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| Symbol | |
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| ID | 3906988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4814233 |
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| End bp | 4815060 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637881356 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_483106 |
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| Protein GI | 86742706 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGTCTC TCCGGGTGGG TAACGTCGCG CTGGACGCAT GTTTGCTGGA GGCCATCGTG
GAGCTGGAAG CTGCGGACTA CCGCCGCACT CTCGCGGTGA TCAACGACTG TGTCGGTGCG
ACCGAGTCAC CGTCCTTCCG TAGCGTCGTC CTCGACGCGT TCTCGGCGCA CCTTGGCTAC
GAGCACCTCA CCTTCTCCCT CGGCCGCCAC CCGTCATTGC AGCTGGAATT GAGCGAGCCC
CGCACTCGTG GCATCCTTCC CGAGCTCATG GCACGCTACC TGGACAGGTA TGCCGGTCGA
GATGTCTTCG CGCACAAGTT CGCTCGTCAA CTGATGCAGG AATACGGCCA GGCCGTGCTC
CCGCAACTGG CAGAGATGGC CCTCGGCAAC GACAGATGCG GAGAATTCCT CGAGGATTTC
TTGCCGCAAA ACGACATCAG TGACAAGATC CTCGTCTGGC TGGATACCTC GCTGCCCGTT
CACGGTTACA TCGGAGTCGT CGCGACGGGC GGGCGCACCT TCGATCATAG AGATCACGAA
CTCCTGCGGG GACTTCGGCC GACGTTGTCG TACCTGCTGC GCAGCCATCT CGAACATCAG
GTCGCGCCGG CGGGAATAGT CTTGTCGATC CGCGAGCACG AAATCGCCCG CTACGTTGCC
GATGGATGGC CCAACAGATT GATCGCTCGG GAGCTCGGGA TCTCGGAGTG GACCGTCAAA
CGTCACATCA CCCATGTGCT CGCCAAGTGC GGCGTGCGGT CACGTACCGA GCTGGCCATC
ATGTGGCAGT CCGGCAGACG CGGAACCGAC GCCGCGGAGC TCCTCTGA
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| Protein sequence | MASLRVGNVA LDACLLEAIV ELEAADYRRT LAVINDCVGA TESPSFRSVV LDAFSAHLGY
EHLTFSLGRH PSLQLELSEP RTRGILPELM ARYLDRYAGR DVFAHKFARQ LMQEYGQAVL
PQLAEMALGN DRCGEFLEDF LPQNDISDKI LVWLDTSLPV HGYIGVVATG GRTFDHRDHE
LLRGLRPTLS YLLRSHLEHQ VAPAGIVLSI REHEIARYVA DGWPNRLIAR ELGISEWTVK
RHITHVLAKC GVRSRTELAI MWQSGRRGTD AAELL
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