More than 300 homologs were found in PanDaTox collection
for query gene Daci_0218 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  100 
 
 		 339 aa  681    Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  59.67 
 
 		 297 aa  337  1.9999999999999998e-91  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  56.21 
 
 		 306 aa  324  2e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal  1 
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  54.4 
 
 		 302 aa  300  3e-80  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  42.81 
 
 		 303 aa  246  4e-64  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.13601 
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  44.81 
 
 		 305 aa  244  9.999999999999999e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_008740  Maqu_3869  response regulator receiver protein  43.61 
 
 		 301 aa  237  2e-61  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  45.17 
 
 		 333 aa  234  1.0000000000000001e-60  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal  1 
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  44.11 
 
 		 309 aa  233  4.0000000000000004e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal  1 
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  43.43 
 
 		 309 aa  233  4.0000000000000004e-60  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal  1 
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  44.59 
 
 		 301 aa  231  1e-59  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  41.69 
 
 		 309 aa  231  2e-59  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  44.52 
 
 		 308 aa  230  3e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  44.58 
 
 		 316 aa  230  3e-59  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  42.67 
 
 		 311 aa  228  1e-58  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  45.1 
 
 		 308 aa  226  5.0000000000000005e-58  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal  1 
 
 
-
 
NC_009620  Smed_4179  response regulator receiver protein  41.16 
 
 		 309 aa  224  2e-57  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.15819 
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  43.49 
 
 		 301 aa  221  9.999999999999999e-57  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal  1 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  40.18 
 
 		 361 aa  219  3.9999999999999997e-56  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0962  response regulator receiver protein  41.56 
 
 		 304 aa  219  3.9999999999999997e-56  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal  1 
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  43.81 
 
 		 300 aa  219  7e-56  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  41.37 
 
 		 312 aa  219  7e-56  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  43.81 
 
 		 300 aa  218  1e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal  1 
 
 
-
 
NC_011666  Msil_2002  two component transcriptional regulator, LuxR family  41.29 
 
 		 306 aa  218  1e-55  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007908  Rfer_3397  two component LuxR family transcriptional regulator  42.44 
 
 		 328 aa  218  2e-55  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  41.23 
 
 		 305 aa  216  4e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  41.04 
 
 		 305 aa  214  1.9999999999999998e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.536368 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  40.31 
 
 		 292 aa  212  5.999999999999999e-54  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  40.44 
 
 		 312 aa  210  2e-53  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  40.44 
 
 		 312 aa  210  2e-53  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  40 
 
 		 336 aa  209  5e-53  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  39.24 
 
 		 295 aa  209  7e-53  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_010505  Mrad2831_5514  two component LuxR family transcriptional regulator  42.68 
 
 		 305 aa  209  8e-53  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.211273 
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  39.08 
 
 		 349 aa  205  7e-52  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  39.81 
 
 		 312 aa  205  1e-51  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.917296 
 
 
-
 
NC_008786  Veis_1731  response regulator receiver protein  41.59 
 
 		 361 aa  204  2e-51  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.319975 
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  41.64 
 
 		 353 aa  201  1.9999999999999998e-50  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  38.66 
 
 		 356 aa  201  1.9999999999999998e-50  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  36.59 
 
 		 298 aa  201  1.9999999999999998e-50  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_1665  two component LuxR family transcriptional regulator  39.43 
 
 		 307 aa  192  5e-48  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  35.9 
 
 		 301 aa  167  2.9999999999999998e-40  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  46.21 
 
 		 222 aa  135  9.999999999999999e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  47.24 
 
 		 566 aa  124  3e-27  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal  1 
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  41.18 
 
 		 441 aa  122  8e-27  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  48.51 
 
 		 386 aa  122  9e-27  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  35.98 
 
 		 452 aa  121  9.999999999999999e-27  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  44.19 
 
 		 488 aa  121  9.999999999999999e-27  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.182398 
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  42.68 
 
 		 386 aa  120  1.9999999999999998e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal  1 
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  39.26 
 
 		 441 aa  120  3e-26  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  47.9 
 
 		 367 aa  119  6e-26  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  45.38 
 
 		 378 aa  119  7e-26  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.215089 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  39.46 
 
 		 407 aa  115  8.999999999999998e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  41.09 
 
 		 437 aa  114  3e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  48.28 
 
 		 541 aa  113  5e-24  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.59439 
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  43.97 
 
 		 372 aa  112  8.000000000000001e-24  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  39.68 
 
 		 440 aa  112  9e-24  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  43.31 
 
 		 541 aa  112  1.0000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  40.94 
 
 		 337 aa  111  1.0000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  38.13 
 
 		 308 aa  112  1.0000000000000001e-23  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  38.13 
 
 		 308 aa  112  1.0000000000000001e-23  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  45.24 
 
 		 397 aa  111  1.0000000000000001e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.543575 
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  45.67 
 
 		 373 aa  110  2.0000000000000002e-23  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  42.74 
 
 		 443 aa  110  3e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.394463 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  43.1 
 
 		 553 aa  110  4.0000000000000004e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.914679 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  42.97 
 
 		 715 aa  110  4.0000000000000004e-23  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal  1 
 
 
-
 
NC_011726  PCC8801_1350  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  42.19 
 
 		 715 aa  108  1e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  39.53 
 
 		 437 aa  108  2e-22  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  39.85 
 
 		 363 aa  107  4e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_2397  two component transcriptional regulator, AraC family  42.07 
 
 		 269 aa  105  9e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  0.92999  normal  0.351016 
 
 
-
 
NC_011884  Cyan7425_1002  signal transduction histidine kinase  38.71 
 
 		 932 aa  104  2e-21  Cyanothece sp. PCC 7425  Bacteria  normal  0.353608  normal  0.0662086 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  45.69 
 
 		 395 aa  104  2e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  36.96 
 
 		 317 aa  103  3e-21  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_2052  response regulator receiver modulated diguanylate cyclase  40.32 
 
 		 481 aa  103  3e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2076  response regulator receiver modulated diguanylate cyclase  40.32 
 
 		 481 aa  103  3e-21  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.00773841  normal  1 
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  36.96 
 
 		 317 aa  103  3e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_1074  response regulator receiver sensor signal transduction histidine kinase  29.17 
 
 		 433 aa  103  4e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  0.708962  normal  1 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  38.28 
 
 		 383 aa  103  5e-21  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  34.78 
 
 		 374 aa  102  9e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  34.78 
 
 		 374 aa  102  9e-21  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_0045  adenylate/guanylate cyclase  36.56 
 
 		 382 aa  102  1e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  37.95 
 
 		 363 aa  101  2e-20  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  36.84 
 
 		 440 aa  101  2e-20  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal  1 
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  37.21 
 
 		 384 aa  101  2e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_008687  Pden_3311  response regulator receiver protein  34.38 
 
 		 321 aa  101  2e-20  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.479786 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  38.76 
 
 		 314 aa  100  3e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  36.15 
 
 		 395 aa  100  3e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  36.15 
 
 		 395 aa  100  3e-20  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal  1 
 
 
-
 
NC_010557  BamMC406_6071  two component AraC family transcriptional regulator  44.53 
 
 		 271 aa  100  4e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  41.73 
 
 		 200 aa  100  5e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0860  response regulator  43.97 
 
 		 339 aa  99.8  6e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.85 
 
 		 593 aa  99.8  6e-20  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal  1 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  41.41 
 
 		 361 aa  99.8  6e-20  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.669597 
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.85 
 
 		 593 aa  99.8  6e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  34.16 
 
 		 331 aa  99.4  7e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  37.1 
 
 		 465 aa  99.4  8e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008392  Bamb_6368  two component AraC family transcriptional regulator  44.53 
 
 		 271 aa  99.4  8e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.434467  normal  1 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  43.97 
 
 		 338 aa  99.4  8e-20  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  43.97 
 
 		 338 aa  99.4  9e-20  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  43.97 
 
 		 338 aa  99.4  9e-20  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  41.27 
 
 		 202 aa  99  1e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal  1 
 
 
-
 
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