Gene Gbem_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1018 
Symbol 
ID6780996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1185327 
End bp1186652 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content53% 
IMG OID642767005 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_002137835 
Protein GI197117408 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00729938 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCA TCATCGCACA GCCAAAAGAT CACGCGGCCG CCATCCTGGT TATAGACGAC 
GACGCCAACA ACCTCGCCAT CGTTTCCTCT TTGTTGCAGG AGTACAGCTA TACCATCTAT
GTGGCGGAGG ATGGCGAGAG CGGCATCAGG CGGGCGCTTT TAACCCGGCC CGATCTGATC
CTGCTGGATG TGCTCATGCC TGGCATCGAC GGTTTCGAAA CCTGCCAGAG GCTCAAGGCC
GTGGAAGCGA CTCGCGACAT CCCGGTTATC TTCATGACTG CGCTGGCGGA GATGGACCAG
AAGGTAAGGG GATTCGACGC CGGGGCTGTG GACTACATAA TCAAGCCTCT TCAGCGCGAG
GAAGTCCTGG CCCGCGTGGG GGTGCATATC CACCTTCGTC ACCTGGCAAA GGAACTGCAG
GAAACCAACG CGTCGCTTGA GAAGCGGGTT GAGGACCGCA CGGCGAGCCT TGCCAGCACA
AACGATGAGT TGCAGAAGGA AATCGCGGAA AGGAAGCTGG CAGAAGAGGC ACTTGCCATT
AAGCAGGAGC AGTTGGAGGC ATTGAACCTG AGTCTGGAGC AACGAGTGAT TGAGGAAGTG
GAAAAAAATC TTCAGAAGGA CCGTCTGTTG TTCCAGAATA CGCGGTTGGC AGCGATGGGT
GAGCTCTTGA ACAACATTGC ACATCAGTGG CGCCAGCCGC TTAACAAGAT CGCGTTATTG
ATCCAGGGCT GCCTGTATGA GTCCAATGAA GGGAAACTGG AACACGAATC TTTTAAAAGC
TGTGTGAATA GATGCATGGA GCATATCACC TATCTGTCGA ATACCATCAA CTCATTCCAA
AGCTTCTTCA TGCCTGAGGG TGAGCCTGGT AAATTCGACC CTTGTGAAAC AGTGGAGAAG
TCGCTGGCAT TAGTCCGGAG CAGCTACGAG GAAAATGGCA TCTCCGTCAG GATCATGAAC
AATGGGTCAG TGCCGATGAT GGGGTTTCGC AACGCATTTT CTCAGGCTGT TTTGAGCATA
CTCAACAACG CCCAGCAGGT GTTGCTGGAA CGCGGCACGC CGCAACGGTT GATCGAGGTG
GAGTGCCTGT ACCGAGACGG CAAAAATATC GTCACGATCA GCGACAACGG CGGCGGGATC
GACGAAAAGA TAATTGGAAA GATTTTCGAT CCTTATTTCA CCACCAAGTT CAAAGCACAA
GGGACCGGCT TAGGGCTTTA CATGGCCAAA ATGATCATCG AAAAGAACAT GGGGGGCAGA
CTTTCCGCAC GCAACACACA GGCAGGAGCC GAGTTCACCA TCGAACTTCC ATTACCGGAC
AGCTGA
 
Protein sequence
MNAIIAQPKD HAAAILVIDD DANNLAIVSS LLQEYSYTIY VAEDGESGIR RALLTRPDLI 
LLDVLMPGID GFETCQRLKA VEATRDIPVI FMTALAEMDQ KVRGFDAGAV DYIIKPLQRE
EVLARVGVHI HLRHLAKELQ ETNASLEKRV EDRTASLAST NDELQKEIAE RKLAEEALAI
KQEQLEALNL SLEQRVIEEV EKNLQKDRLL FQNTRLAAMG ELLNNIAHQW RQPLNKIALL
IQGCLYESNE GKLEHESFKS CVNRCMEHIT YLSNTINSFQ SFFMPEGEPG KFDPCETVEK
SLALVRSSYE ENGISVRIMN NGSVPMMGFR NAFSQAVLSI LNNAQQVLLE RGTPQRLIEV
ECLYRDGKNI VTISDNGGGI DEKIIGKIFD PYFTTKFKAQ GTGLGLYMAK MIIEKNMGGR
LSARNTQAGA EFTIELPLPD S