| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6236 |
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| Symbol | |
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| ID | 6277548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2486428 |
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| End bp | 2488089 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617291 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001889934 |
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| Protein GI | 187920902 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.914679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGC CAAATGTGGA GGCCAGCGTG GAGGCCGGCG AACGGCCGAC CATCCTGATT
GCGGATGACA CGCCGGCGAA TTTCGGCGTG GTCGTGGAGA GCCTGACGGA CCGCGGCTTT
CGGGTACTCG TTGCGCTCGA CGGCGAAGAG GCGCTCGAAC GCGCGCTGTT TTCCCAGCCG
GACCTGATCC TGCTCGACGT GAAAATGCCT GGCATCGACG GCTTCGAGAC CTGCCGGCGA
CTCAAGGCCG ACGCGCGCAC GCGCGATATC ACGGTGATCT TCATGACGTC GCTGACGGGC
GCGGAAGACA TGGTGGAGGG TTTCTCGGCC GGCGGCGTCG ATTACGTGGC CAAGCCTGTG
CGCGTCAACG AAATGATGGC GCGCATCGAA ACGCATCTCG CCTTGCGCGT GATGCACAGG
CAGCTCATCG TGCAGAACCG CCTGCTTCTT AAAGAGGTCG CGGTGCGCCA GCAGGCCGAG
ACGGAACTGT CGAGCGCGCG CGATGCGCTG GAACAGCAGG TCGAGCAGCG CACGCGGCAA
CTCGCGGAGT CGAACACGCG GCTGTCCGCC CAGATCGACG AGCGCCGCCG TGCGGAAGCG
AACTTGCAGG CGAGCGAAGC GCGCTTTCGC ACGATTGTCG AAACCAGCCC GATCCCGCTG
TGCATCACGT CGATGCCCGA AGGCGTCATC CTGTACGTGA ATGAGCCACT GCGAGAGCTA
TTCGGTCTCG ATACCGGCAT GCGCACGCTG ACCAACATTG TCGACTTCTA TATCGACCCC
GCCGATCGTG ACCGGCTCGT ATCGCATCTG CGCGCCGAGG GCAGTTTCAA CAATAGCGAA
GTCCACATGC GGCGCGTGGA CGGTTCGCCG TTCTGGGCCA TAGCGACCGC GCGCGTGGCG
ACTTTCGGCG ATGCTCCGGC GATCTACGTG GGTCTCAGCG ACATCACATC GCGCAAGCGC
ATCGAGCAGG AGCTGTTCGA ATCGCGCAAT CAGTTGCGCG AGTTGTCCGC GTATATGGAG
GCGATTCGCG AGGAAGAGCG CAAGCGCATC GCCATGGAGA TTCACGATGA ACTCGGCCAG
TTGCTGACCG CGTTGAAGAT GGACGTATCG CTGCTGAAGA TGCGCCTCGG CAAGGATCCG
GACGCGATGC GCAAAGCCGA CGACATGCGC GAACTCGTCG AAAAGACGAT CTGGATGGTC
TGCAATGTCG CGAACCATCT GCGGCCGGTG GCGCTGAACT TTGGGGTCGT GTCCGCATTG
GAGTGGCTCG TGGAGGACTT CATTCGACGC CACGGCATTC CTTGCCAGTT GCATATCAAC
GGAGGCGAAC CGGTGCTGCC GGAAGCTTGT GCCACCGCCG TGTTTCGTAT TGTTCAGGCT
TCGCTCACCA ATGTCGGGCG CCACGCGCAT GCCACGCGGG CTGACGTGAC GCTGACCAGC
ACGGCGGCGG CGCTCGACCT TCACGTGAGC GACGACGGCT GTGGTTTCGA TCCCGGCATG
GCGCGCACGG GTTATTCCTA TGGACTGCTC GGCATGCAGG AGCGCGCGCG CCTGATCGGC
GGCGCGATGA CAATTGACAG TGCGCAGGGC ATGGGCACCG CTATTTCCAT TCACATTCCG
CTTACAGGCG GGGCAGAAAA TGATCGACGT CCTGATTGCT GA
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| Protein sequence | MNEPNVEASV EAGERPTILI ADDTPANFGV VVESLTDRGF RVLVALDGEE ALERALFSQP
DLILLDVKMP GIDGFETCRR LKADARTRDI TVIFMTSLTG AEDMVEGFSA GGVDYVAKPV
RVNEMMARIE THLALRVMHR QLIVQNRLLL KEVAVRQQAE TELSSARDAL EQQVEQRTRQ
LAESNTRLSA QIDERRRAEA NLQASEARFR TIVETSPIPL CITSMPEGVI LYVNEPLREL
FGLDTGMRTL TNIVDFYIDP ADRDRLVSHL RAEGSFNNSE VHMRRVDGSP FWAIATARVA
TFGDAPAIYV GLSDITSRKR IEQELFESRN QLRELSAYME AIREEERKRI AMEIHDELGQ
LLTALKMDVS LLKMRLGKDP DAMRKADDMR ELVEKTIWMV CNVANHLRPV ALNFGVVSAL
EWLVEDFIRR HGIPCQLHIN GGEPVLPEAC ATAVFRIVQA SLTNVGRHAH ATRADVTLTS
TAAALDLHVS DDGCGFDPGM ARTGYSYGLL GMQERARLIG GAMTIDSAQG MGTAISIHIP
LTGGAENDRR PDC
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