| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6368 |
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| Symbol | |
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| ID | 4315272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 982384 |
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| End bp | 983199 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154212 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_778246 |
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| Protein GI | 115361109 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.434467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCAT CGACCGCCGC ATTGAATAAT GCCCATATCC TGATCGTCGA CGATCAGCCC
GACCAGCTCC GTTTGCTGAT CGATATCCTG CGCGGCACCG GATGCCGGAT CAGCATCGCA
TTCGACGGCG TGCAGGCGTG CGAGCGCGCG CAGGCACTCG CGCCCGATCT GATCCTGATG
GATGTCCGGA TGCCGCGCAT GGACGGTTTC ACCGCGTGCC GGCGGCTGGC GGCCGATCCG
CTGACGAGCG CGATCCCTGT CATTTTCCTG ACGGTGGCCG GCGATTTGCA CGAGCGCGTC
GAAGGACTCG AAATCGGCGG CGTCGATTAT GTGGTGAAGC CGTTCGAACC GGCCGAAGTC
GTCGCGCGAA TCCGCGTGCA GCTCGCGCGG ACGAAACGGC CGTTGCCGAT CGATGCGCCC
GCCGTGCACG ATCCGTTTGC CACAGGCAAG GACGACGACA TCATCGTGCG CGCGGCCATT
CGGCATCTGT CGCGCACGCT GAACGATCCG CCGACGGTCG AGCAGCTCGC GCGCGCAGTC
GGCACGCACG AGAAGCGGCT GTCGCGCGCG TTTCGCGACA ACCTGGGCCA GACGGTGTTC
GAATATCTGC GGCACGAGCG CCTGCGCATC GCGCAGGACC TGCTCGATAC GACGTCGCTC
AGCATTGCGA GCATCGCGAA GGAGATCGGC TTTTCGACGC CGGCGAATTT CGCCACCGCG
TTTCGCGAAC GGTTCGGCAT CACGCCGACC GAATGGCGGC GACAGCGCGA TGCGGCCGGG
CGTGATGCCG CGCGGGAACC GCAGCGCGAC GCGTAG
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| Protein sequence | MSPSTAALNN AHILIVDDQP DQLRLLIDIL RGTGCRISIA FDGVQACERA QALAPDLILM
DVRMPRMDGF TACRRLAADP LTSAIPVIFL TVAGDLHERV EGLEIGGVDY VVKPFEPAEV
VARIRVQLAR TKRPLPIDAP AVHDPFATGK DDDIIVRAAI RHLSRTLNDP PTVEQLARAV
GTHEKRLSRA FRDNLGQTVF EYLRHERLRI AQDLLDTTSL SIASIAKEIG FSTPANFATA
FRERFGITPT EWRRQRDAAG RDAAREPQRD A
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