Gene Mpop_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3574 
Symbol 
ID6311600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3814154 
End bp3815059 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID642652296 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001926258 
Protein GI188582813 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0249095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGG CGCAGCGCGA CATCGTCCTC GTCGTCGATG ATTCCCCCGA TACCCTGAGC 
TTCCTCACCG AGGCGATCGA GCGCTCCGGG GCCACGGTGC TGGTGGCGGT GGGCGGCGAC
CTCGCCCTCG ACCTCGTCGA GGAGATCACC CCCGACATCA TCCTGCTCGA CGCGGTGATG
CCGGGCATGG ACGGGTTCGA GACCTGCCGC CGCCTCAAGG CCAAGGGCCG GCTCGCCCAC
GTGCCCGTCA TCTTCATGAC CGGGTTGTCC GAGACCGAGC ACATCGTGAA GGGCCTGGAG
GCGGGCGGGA TCGACTACGT CACCAAGCCG ATCGCCCCCG ACGAGATCCT GGCCCGCATC
CGGGTCCATC TGGCCAATGC CCGCTCCGCG CAGAGCGCGC GGGCCGCCCT CGACACCGCC
GGGCGCACCC TGTTCGCGGT CGATGCCGCC GGTTCGGTCC TGTGGTGCAC GCCGCAGGCC
GCGCAGGTGC TCGCCGCGCT CGGCAGTTCA GAGCCGCTCG CCTTGCCGCC GAGCGGGCGC
GAGTGGCTGC AACGCTGCCT GAGCGGCCAT GGCACGGCCC CCCTGGCGCT CACCGACGGG
CAAGGCCGCG CCCATTCGCT CAGCTTCATC GGGCGCACCG GCCCCGAGAT CCTTCTGCGC
CTCTCCGGCG ATCCCACCGC CGCCGGCCTG GAGCGGCTGC GCGAGCGCCT GCCGATCACC
GGCCGCGAGG CGGAAGTGCT GCTCTGGCTT TCCCGCGGCA AATCGAGCCG CGACATCGGC
GAGATCCTGG GCTTGAGCCC CCGCACGGTG ACGAAGCACC TGGAGGGCAT CTACGCCAAG
CTCGGCGTCG AGAACCGCAC CGCGGCCTCG GCGGTGGCGG CGCGGCACCT GCGCGATCTG
GACTGA
 
Protein sequence
MPEAQRDIVL VVDDSPDTLS FLTEAIERSG ATVLVAVGGD LALDLVEEIT PDIILLDAVM 
PGMDGFETCR RLKAKGRLAH VPVIFMTGLS ETEHIVKGLE AGGIDYVTKP IAPDEILARI
RVHLANARSA QSARAALDTA GRTLFAVDAA GSVLWCTPQA AQVLAALGSS EPLALPPSGR
EWLQRCLSGH GTAPLALTDG QGRAHSLSFI GRTGPEILLR LSGDPTAAGL ERLRERLPIT
GREAEVLLWL SRGKSSRDIG EILGLSPRTV TKHLEGIYAK LGVENRTAAS AVAARHLRDL
D