More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_3066 on replicon NC_011369
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  100 
 
 		 305 aa  612  9.999999999999999e-175  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  95.08 
 
 		 305 aa  588  1e-167  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.536368 
 
 
-
 
NC_009620  Smed_4179  response regulator receiver protein  78.88 
 
 		 309 aa  476  1e-133  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.15819 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  74.5 
 
 		 312 aa  451  1.0000000000000001e-126  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  57.57 
 
 		 301 aa  329  4e-89  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  55.18 
 
 		 309 aa  320  1.9999999999999998e-86  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  53.67 
 
 		 305 aa  318  5e-86  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  55.4 
 
 		 309 aa  308  5e-83  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal  1 
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  55.4 
 
 		 309 aa  305  8.000000000000001e-82  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal  1 
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  54.36 
 
 		 308 aa  304  1.0000000000000001e-81  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  56.52 
 
 		 301 aa  299  5e-80  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal  1 
 
 
-
 
NC_011666  Msil_2002  two component transcriptional regulator, LuxR family  50.16 
 
 		 306 aa  295  5e-79  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  56.19 
 
 		 300 aa  293  2e-78  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal  1 
 
 
-
 
NC_010505  Mrad2831_5514  two component LuxR family transcriptional regulator  56.04 
 
 		 305 aa  293  3e-78  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.211273 
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  55.85 
 
 		 300 aa  292  5e-78  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_3869  response regulator receiver protein  49.17 
 
 		 301 aa  288  1e-76  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  46.67 
 
 		 303 aa  277  2e-73  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.13601 
 
 
-
 
NC_009654  Mmwyl1_0962  response regulator receiver protein  48.84 
 
 		 304 aa  276  4e-73  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal  1 
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  44.41 
 
 		 298 aa  263  2e-69  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  48.1 
 
 		 333 aa  261  8.999999999999999e-69  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal  1 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  48.46 
 
 		 306 aa  242  5e-63  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal  1 
 
 
-
 
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  48.97 
 
 		 308 aa  241  9e-63  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal  1 
 
 
-
 
NC_007794  Saro_1665  two component LuxR family transcriptional regulator  43 
 
 		 307 aa  240  2e-62  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  44.1 
 
 		 292 aa  240  2e-62  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  46.08 
 
 		 297 aa  238  6.999999999999999e-62  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  41.58 
 
 		 295 aa  235  9e-61  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  47.51 
 
 		 316 aa  234  2.0000000000000002e-60  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  47.39 
 
 		 302 aa  234  2.0000000000000002e-60  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  45.61 
 
 		 311 aa  233  4.0000000000000004e-60  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  45 
 
 		 349 aa  232  5e-60  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  42.42 
 
 		 336 aa  231  2e-59  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_3397  two component LuxR family transcriptional regulator  45.58 
 
 		 328 aa  228  1e-58  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  43.36 
 
 		 356 aa  226  4e-58  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  41.67 
 
 		 312 aa  225  8e-58  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.917296 
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  41.81 
 
 		 312 aa  224  2e-57  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  41.81 
 
 		 312 aa  224  2e-57  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_1731  response regulator receiver protein  42.09 
 
 		 361 aa  222  6e-57  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.319975 
 
 
-
 
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  41.23 
 
 		 339 aa  216  4e-55  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  41.98 
 
 		 353 aa  213  1.9999999999999998e-54  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  38.1 
 
 		 361 aa  202  8e-51  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal  1 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  36.66 
 
 		 301 aa  171  2e-41  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  51.52 
 
 		 222 aa  152  5e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  53.85 
 
 		 337 aa  137  3.0000000000000003e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  52.07 
 
 		 407 aa  131  2.0000000000000002e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.142048 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  49.61 
 
 		 437 aa  130  2.0000000000000002e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  48.03 
 
 		 566 aa  129  6e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal  1 
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  48.03 
 
 		 437 aa  129  8.000000000000001e-29  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  47.01 
 
 		 397 aa  126  6e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.543575 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  50.86 
 
 		 395 aa  125  9e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  48.72 
 
 		 440 aa  125  1e-27  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  46.72 
 
 		 200 aa  124  2e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  47.58 
 
 		 488 aa  124  3e-27  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.182398 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  47.83 
 
 		 541 aa  123  3e-27  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.59439 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  48.31 
 
 		 367 aa  122  6e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  49.58 
 
 		 553 aa  122  7e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.914679 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  51.69 
 
 		 541 aa  122  8e-27  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  43.65 
 
 		 314 aa  121  1.9999999999999998e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  47.11 
 
 		 452 aa  119  6e-26  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  40.69 
 
 		 363 aa  117  1.9999999999999998e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2262  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  47.93 
 
 		 853 aa  117  3e-25  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  44.92 
 
 		 386 aa  116  3.9999999999999997e-25  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  44.92 
 
 		 386 aa  116  5e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal  1 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  47.66 
 
 		 229 aa  116  5e-25  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  42.86 
 
 		 353 aa  116  6e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  47.66 
 
 		 229 aa  115  7.999999999999999e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.14031 
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  28.17 
 
 		 322 aa  114  2.0000000000000002e-24  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  45.69 
 
 		 383 aa  114  3e-24  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  45.97 
 
 		 379 aa  113  4.0000000000000004e-24  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  46.67 
 
 		 202 aa  113  4.0000000000000004e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal  1 
 
 
-
 
NC_012560  Avin_29300  Response regulator  48.39 
 
 		 310 aa  113  4.0000000000000004e-24  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  43.44 
 
 		 376 aa  113  5e-24  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  39.42 
 
 		 322 aa  112  6e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  44.09 
 
 		 443 aa  112  1.0000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.394463 
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  45.38 
 
 		 440 aa  112  1.0000000000000001e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal  1 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  40.46 
 
 		 317 aa  111  2.0000000000000002e-23  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  42.4 
 
 		 349 aa  109  5e-23  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  33.33 
 
 		 308 aa  109  6e-23  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  49.14 
 
 		 312 aa  109  7.000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  43.8 
 
 		 170 aa  109  7.000000000000001e-23  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  45.59 
 
 		 312 aa  109  7.000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_3071  response regulator receiver protein  42.75 
 
 		 390 aa  109  7.000000000000001e-23  Magnetococcus sp. MC-1  Bacteria  normal  1  hitchhiker  0.000442652 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  45.83 
 
 		 363 aa  108  8.000000000000001e-23  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_2397  two component transcriptional regulator, AraC family  44.8 
 
 		 269 aa  108  9.000000000000001e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  0.92999  normal  0.351016 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  38.57 
 
 		 378 aa  108  1e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.215089 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  38.4 
 
 		 308 aa  108  1e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  38.4 
 
 		 308 aa  108  1e-22  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_3384  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.09 
 
 		 829 aa  108  1e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  44.83 
 
 		 372 aa  107  2e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  42.24 
 
 		 441 aa  107  2e-22  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  42.06 
 
 		 358 aa  107  3e-22  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1771  PAS:GGDEF  40.26 
 
 		 449 aa  107  3e-22  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  41.18 
 
 		 359 aa  107  3e-22  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  49.57 
 
 		 377 aa  107  3e-22  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_007498  Pcar_1055  two component signal transduction response regulator  40.77 
 
 		 734 aa  107  3e-22  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0148851  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  41.46 
 
 		 361 aa  107  3e-22  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.669597 
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  40.62 
 
 		 227 aa  107  3e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  40 
 
 		 441 aa  106  5e-22  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_010524  Lcho_3702  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  36.31 
 
 		 863 aa  106  5e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.170309 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  42.28 
 
 		 383 aa  106  6e-22  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  42.28 
 
 		 383 aa  105  7e-22  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
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