| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3147 |
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| Symbol | |
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| ID | 7974357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3309639 |
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| End bp | 3310547 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793732 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002945032 |
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| Protein GI | 239816122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.235206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAC TCTCGCCCCC TGATGAAGCC GAACGCCCCG TGGTGCTGGT GGTGGACGAC
GCCCCCAGCA GCCTCGGCAT GCTGTGCGAC ACGCTCGAAT CGAGCGGCTA CACCGTGCTG
GTCGCGGCCG ACGGCGAGGC CGCGCTGCAG CGCCTCGAAC TGGTGGTGCC CGACGCGATC
CTGCTCGACG GCCTGATGCC CGGCCTGTCG GGCTTCGAGA CCTGCCGGCG CATCAAGGCC
AATGCGGCGC TCGCGCACAT TCCGGTGCTG TTCATGACCG GCCTTTCGGA AACCGCGCAC
GTGGTCGAGG GCTTCGAATG CGGCGGCGTC GACTACGTGG TGAAGCCGAT CCGCGCGCAG
GAGGTGCTCG CGCGGCTGCA CACGCACACG CGCAACGCGC GCATCACGCG CATGGCGCGC
GACGCGGTCG ACGTGGCCGG CATGGGCGTG GTCTTTGTCG ATGCGCGCGG GCGCATCGCA
TGGCGCTCGC CGCAAGCCGC GCTGTGGCTG CATGCGCTCG ATGCGGCGCC GGCCGCCGGG
CTGCTGCCCG CCGCGCTCGC ACCCGCGCTT GCGCCCGGCG CGGCCATTGC AGTGGCCACG
GCGGCAGGCG CACGCATCTC GGTGCGCAAC CTCGGCGCCG CGGCGCTCGG CGAAACCATG
CTGCTGTTCG CGGCGCAGCG CGAAGGGGCC GCGGGCAAGC CGTCGGCGCG GCTGGCCGAA
GCGGCGCTCA CGCCGCGCGA GACCGAAGTG CTCTCATGGC TTGCCAAGGG CAAGACCAAC
CGCGACATCG GCGAGATCCT GGGCACCAGC CCGCGCACCG TCAACAAGCA CCTCGAGCAC
ATCTTCGAGA AGCTGGGCGT CGAGACGCGC GCTGCCGCGG CGGCACTGGC CAGCGGACAG
CTGGCCTGA
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| Protein sequence | MQTLSPPDEA ERPVVLVVDD APSSLGMLCD TLESSGYTVL VAADGEAALQ RLELVVPDAI
LLDGLMPGLS GFETCRRIKA NAALAHIPVL FMTGLSETAH VVEGFECGGV DYVVKPIRAQ
EVLARLHTHT RNARITRMAR DAVDVAGMGV VFVDARGRIA WRSPQAALWL HALDAAPAAG
LLPAALAPAL APGAAIAVAT AAGARISVRN LGAAALGETM LLFAAQREGA AGKPSARLAE
AALTPRETEV LSWLAKGKTN RDIGEILGTS PRTVNKHLEH IFEKLGVETR AAAAALASGQ
LA
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