Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1771 |
Symbol | |
ID | 3567829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1906192 |
End bp | 1907541 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637680240 |
Product | PAS:GGDEF |
Protein accession | YP_284988 |
Protein GI | 71907401 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCAC GCAAACCGCG CATCCTGGCC ATCGACGATA TGCCGGGAAA TCTATATACG CTAGGGACCG CCCTGGCTAA CGACTTCGAC CTGGAAATCG CCACCTCGGG CAGTCAGGGA CTGACCATGG CAAAACATTC GCCCCCCGAT CTGGTCCTGC TCGATATCAT GATGCCGGAA ATGGATGGCC TTGAAACCTG TCGCCGTTTC CGCAGTGACC CTCGCCTGCA GGCCGTTCCC ATCATCTTCC TGACCGCGCT CACCGACGTC GACTCGGAGG TGACAGGCCT CGATCTTGGC GTGGCAGACT ACATCACCAA GCCATTCCAC CTCGATATCG TCAAACTACG TATCCGAAAC ACCCTCAAGT TAGCCAGCCT AAACCGGGAA TTGCGGGCCA GCGAAGAACG CATGCGCTTC GTGCTCGACG CCACCGGCGA TGGCATCTGG GACTGGGAGA TTGAATTCAA TCGCGTCAGT CACAACGAGG CCTGGTGCCG CATGATGGGT TTGGATACGA GTTTTCTCAG CCACCCGCTC GCGGATTACG TCGAGCGCAT TCACCCCGAA GACCTCGCTG CGGTCGAGCG GGCGCTGGAT ATCAGCACCC ATGAAAACAC GCTCTTCACC GCTGAATACC GCATCCGGCA TAGTGATGGG CACTATTTGT GGATATCGGA TACCGGCCAG GTCGTTGACC GGGACATCGA CGGCAAGGCG AGCCGCATGG TTGGCTGCGT CAAGAATATC GATGAGCGGA AACGCAGCGA AGCCGATATT CACAGACTGG CTTTTTTCGA CGCACTGACC GAACTGCCCA ATCGCCGGCT ATTGATGGAC CGCCTGCAAC AGGCCATTTT CCACAACACC CGGAATAACA GCCTGGGTGC CCTGTTATTC CTGGACATGG ACCACTTCAA GCAACTGAAC GACACCCACG GACATGCCAT GGGCGATGCC ATGCTCATTC AGGTTGCTTC ACGGCTTAGA CGCAACGTGC GCGAACAGGA CACAGTTTCG CGCCTGGGAG GGGACGAATT CGTTGTCCTG CTCGAAAGCC TGGCCCCTGA CCCGGTTAGC GCCGGCAATG CGGCAACACT CATTGGCGAG AAGTTGCTGG GCGCCTTGAA TAGTCCTTAC CAGTTGGGCT CCATCAAGCA CCACAGTAGC CCCAGTATCG GCCTCACCCT GTTTGGTGGT GACAACGAAC AACTCGATGA GATCCTGAAG CGGGCAGACC ATGCCATGTA CGAAGCCAAG GGGGCCGGAC GCAACACCTT GCGCACACTG ATCGATACCG AGCAACTACG TGCCACCCAG CCCAATCGGG GCAAGCCAAC ATCCGCTTGA
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Protein sequence | MSPRKPRILA IDDMPGNLYT LGTALANDFD LEIATSGSQG LTMAKHSPPD LVLLDIMMPE MDGLETCRRF RSDPRLQAVP IIFLTALTDV DSEVTGLDLG VADYITKPFH LDIVKLRIRN TLKLASLNRE LRASEERMRF VLDATGDGIW DWEIEFNRVS HNEAWCRMMG LDTSFLSHPL ADYVERIHPE DLAAVERALD ISTHENTLFT AEYRIRHSDG HYLWISDTGQ VVDRDIDGKA SRMVGCVKNI DERKRSEADI HRLAFFDALT ELPNRRLLMD RLQQAIFHNT RNNSLGALLF LDMDHFKQLN DTHGHAMGDA MLIQVASRLR RNVREQDTVS RLGGDEFVVL LESLAPDPVS AGNAATLIGE KLLGALNSPY QLGSIKHHSS PSIGLTLFGG DNEQLDEILK RADHAMYEAK GAGRNTLRTL IDTEQLRATQ PNRGKPTSA
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