Gene Avi_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3499 
Symbol 
ID7388771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2901073 
End bp2902011 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content65% 
IMG OID643652339 
Producttranscriptional regulator LuxR family 
Protein accessionYP_002550522 
Protein GI222149565 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAC CGACCTCCCC CCGCGACATC ATCCTCCTTG TCGATGACAG CCCGGAAGCG 
CTGGGTTTTC TAACCGATGC GCTGGAACAG TCAGGCTTTT CCGTGCTGAT TGCCACGTCC
GGCCAAGGGG CGCTGGGCAT TGTCGAGCGG ATCAGCCCGG ACCTGATCCT GCTGGATGCG
GTCATGCCCG GCATGGATGG GTTCGAGACC TGCCGCCAAA TCAAGGCCAA TCCGGCGGTG
GCGCAGGTGC CGGTGATTTT CATGACCGGC CTTAGCGAAA CCGAACATGT GGTGCATGCG
TTGGAGGTCG GCGGCGTCGA TTACCTGACC AAGCCGATCA ATATCGATGA GCTGCGCGCC
CGTATCCGCG TGCATCTGGC CAATGCCCGG TCTGCCCAAA GCGCCCGTGT CGCGCTGGAT
GCCGCAGGTC GCCACCTGCT GGCCCTGCGC GCCGATGGCA GCCTGCTGTG GTCCACTCCG
CAGGCCAGCC GGCTGATCAC CACCGCCACC GGACGTGAAG ACGGGCTGGA TACCGTGATC
ACGGCCATCG GCGACTGGAT GCAGGCCCGT ACAACCTCAC CGCCTGCCGC AAGCCCCGCC
TCCCGCGAGG CCGCCCTGAC CTTGCCGCTT GAAAACCACC CTGCCCTGCA AATCGCCTAT
CTCGGTGCGA TGGCCGCCGA CGAATACCTG TTCCGCCTCA GCGCTGCCAA CCCGCACCGC
GAAGACGAAC GGCTGCGCCA GGCCTTTGGC CTTACCCAGC GCGAATCCGA AGTCCTTCTC
TGGATCGCCC GCGGCAAACC CAACCGCGAC ATCGGCGAAA TCCTCGGCCT CGCCGCCCGC
ACCGTGAACA AGCATCTGGA ACAGATTTAT GTGAAGCTCG GCGTGGAGAA CCGGGCGTCT
GCGGCAGTGA AGGCGGCGGC GGTGTTGCGG GTGGAGTGA
 
Protein sequence
MAEPTSPRDI ILLVDDSPEA LGFLTDALEQ SGFSVLIATS GQGALGIVER ISPDLILLDA 
VMPGMDGFET CRQIKANPAV AQVPVIFMTG LSETEHVVHA LEVGGVDYLT KPINIDELRA
RIRVHLANAR SAQSARVALD AAGRHLLALR ADGSLLWSTP QASRLITTAT GREDGLDTVI
TAIGDWMQAR TTSPPAASPA SREAALTLPL ENHPALQIAY LGAMAADEYL FRLSAANPHR
EDERLRQAFG LTQRESEVLL WIARGKPNRD IGEILGLAAR TVNKHLEQIY VKLGVENRAS
AAVKAAAVLR VE