Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3499 |
Symbol | |
ID | 7388771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2901073 |
End bp | 2902011 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643652339 |
Product | transcriptional regulator LuxR family |
Protein accession | YP_002550522 |
Protein GI | 222149565 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAC CGACCTCCCC CCGCGACATC ATCCTCCTTG TCGATGACAG CCCGGAAGCG CTGGGTTTTC TAACCGATGC GCTGGAACAG TCAGGCTTTT CCGTGCTGAT TGCCACGTCC GGCCAAGGGG CGCTGGGCAT TGTCGAGCGG ATCAGCCCGG ACCTGATCCT GCTGGATGCG GTCATGCCCG GCATGGATGG GTTCGAGACC TGCCGCCAAA TCAAGGCCAA TCCGGCGGTG GCGCAGGTGC CGGTGATTTT CATGACCGGC CTTAGCGAAA CCGAACATGT GGTGCATGCG TTGGAGGTCG GCGGCGTCGA TTACCTGACC AAGCCGATCA ATATCGATGA GCTGCGCGCC CGTATCCGCG TGCATCTGGC CAATGCCCGG TCTGCCCAAA GCGCCCGTGT CGCGCTGGAT GCCGCAGGTC GCCACCTGCT GGCCCTGCGC GCCGATGGCA GCCTGCTGTG GTCCACTCCG CAGGCCAGCC GGCTGATCAC CACCGCCACC GGACGTGAAG ACGGGCTGGA TACCGTGATC ACGGCCATCG GCGACTGGAT GCAGGCCCGT ACAACCTCAC CGCCTGCCGC AAGCCCCGCC TCCCGCGAGG CCGCCCTGAC CTTGCCGCTT GAAAACCACC CTGCCCTGCA AATCGCCTAT CTCGGTGCGA TGGCCGCCGA CGAATACCTG TTCCGCCTCA GCGCTGCCAA CCCGCACCGC GAAGACGAAC GGCTGCGCCA GGCCTTTGGC CTTACCCAGC GCGAATCCGA AGTCCTTCTC TGGATCGCCC GCGGCAAACC CAACCGCGAC ATCGGCGAAA TCCTCGGCCT CGCCGCCCGC ACCGTGAACA AGCATCTGGA ACAGATTTAT GTGAAGCTCG GCGTGGAGAA CCGGGCGTCT GCGGCAGTGA AGGCGGCGGC GGTGTTGCGG GTGGAGTGA
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Protein sequence | MAEPTSPRDI ILLVDDSPEA LGFLTDALEQ SGFSVLIATS GQGALGIVER ISPDLILLDA VMPGMDGFET CRQIKANPAV AQVPVIFMTG LSETEHVVHA LEVGGVDYLT KPINIDELRA RIRVHLANAR SAQSARVALD AAGRHLLALR ADGSLLWSTP QASRLITTAT GREDGLDTVI TAIGDWMQAR TTSPPAASPA SREAALTLPL ENHPALQIAY LGAMAADEYL FRLSAANPHR EDERLRQAFG LTQRESEVLL WIARGKPNRD IGEILGLAAR TVNKHLEQIY VKLGVENRAS AAVKAAAVLR VE
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